RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 LCN1P1Q5VSP4 162 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 ZNF595Q8IYB9 648 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 CAMKK1Q8N5S9 505 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 GRHL3Q8TE85 626 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 YIPF5Q969M3 257 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 LRRN3Q9H3W5 708 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 TRIM36Q9NQ86 728 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 ATPIF1Q9UII2 106 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 KLHDC2Q9Y2U9 406 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 FAM172BPA6NC97 362 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 OR2W5A6NFC9 320 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 LILRA5A6NI73 299 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 A8MV72 311 aaPredicted RBP8.77□□□□□ -1.01
TRIM39-202ENST00000376659 CTDSPLO15194 276 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 OR7A10O76100 309 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 MRPL3P09001 348 aaKnown RBP8.77□□□□□ -1.01
TRIM39-202ENST00000376659 SLC2A2P11168 524 aaPredicted RBP8.77□□□□□ -1.01
TRIM39-202ENST00000376659 HHEXQ03014 270 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 ILF3Q12906 894 aaKnown RBP eCLIP8.77□□□□□ -1.01
TRIM39-202ENST00000376659 GPR176Q14439 515 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 CCDC58Q4VC31 144 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 FAM199XQ6PEV8 388 aaPredicted RBP8.77□□□□□ -1.01
TRIM39-202ENST00000376659 ULK3Q6PHR2 472 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 KIAA1324Q6UXG2 1013 aaKnown RBP8.77□□□□□ -1.01
TRIM39-202ENST00000376659 GPALPP1Q8IXQ4 340 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 ZNF441Q8N8Z8 693 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 ZDHHC1Q8WTX9 485 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 SCMH1Q96GD3 660 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 ZNF578Q96N58 590 aaPredicted RBP8.77□□□□□ -1.01
TRIM39-202ENST00000376659 SLC19A3Q9BZV2 496 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 GHITMQ9H3K2 345 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 NUFIP1Q9UHK0 495 aaKnown RBP8.77□□□□□ -1.01
TRIM39-202ENST00000376659 HIF3AQ9Y2N7 669 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 ADAM18Q9Y3Q7 739 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 FREM2Q5SZK8 3169 aa8.77□□□□□ -1.01
TRIM39-202ENST00000376659 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.76□□□□□ -1.01
TRIM39-202ENST00000376659 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.76□□□□□ -1.01
TRIM39-202ENST00000376659 H3BUI4 141 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 FZD7O75084 574 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 MT-ND5P03915 603 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 GYPBP06028 91 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 ADRB1P08588 477 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 MAOAP21397 527 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 RACK1P63244 317 aaKnown RBP8.76□□□□□ -1.01
TRIM39-202ENST00000376659 MAT1AQ00266 395 aaKnown RBP8.76□□□□□ -1.01
TRIM39-202ENST00000376659 RAB30Q15771 203 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 PYDC2Q56P42 97 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 ZNF542PQ5EBM4 170 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 LYPD4Q6UWN0 246 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 MCATQ8IVS2 390 aaKnown RBP8.76□□□□□ -1.01
TRIM39-202ENST00000376659 GPR135Q8IZ08 494 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 POMGNT2Q8NAT1 580 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 CYB561A3Q8NBI2 242 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 CREB3L1Q96BA8 519 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 SLC25A38Q96DW6 304 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 TRIM2Q9C040 744 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 PLEKHA1Q9HB21 404 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 UCKL1Q9NWZ5 548 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 KIAA1549Q9HCM3 1950 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 A0A0A6YYC8 382 aaPredicted RBP8.76□□□□□ -1.01
TRIM39-202ENST00000376659 IGHV1OR15-9A0A0B4J2B8 117 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 SLC9B1P1A6NJY1 282 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 I3L1I5 382 aaPredicted RBP8.76□□□□□ -1.01
TRIM39-202ENST00000376659 UPK3AO75631 287 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 CSF2P04141 144 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 EPXP11678 715 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 SPI1P17947 270 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 DIO1P49895 249 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 ATP12AP54707 1039 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 TAS2R43P59537 309 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 ACTC1P68032 377 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 ACTA1P68133 377 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 CFHR1Q03591 330 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 IL10RAQ13651 578 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 KLF9Q13886 244 aaPredicted RBP8.76□□□□□ -1.01
TRIM39-202ENST00000376659 ZSWIM7Q19AV6 140 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 ALG10BQ5I7T1 473 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 ASPHD2Q6ICH7 369 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 DPY19L2P2Q6ZN68 376 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 OR52L1Q8NGH7 329 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 TOE1Q96GM8 510 aaKnown RBP8.76□□□□□ -1.01
TRIM39-202ENST00000376659 MS4A3Q96HJ5 214 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 FRMD6Q96NE9 622 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 TBX5Q99593 518 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 IFT27Q9BW83 186 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 ADAM19Q9H013 955 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 HCN3Q9P1Z3 774 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 SLC13A4Q9UKG4 626 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 RNF215Q9Y6U7 377 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 SERINC4A6NH21 518 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 MAGEB4O15481 346 aaPredicted RBP8.76□□□□□ -1.01
TRIM39-202ENST00000376659 DDAH2O95865 285 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 APOA1P02647 267 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 CD37P11049 281 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 AHCYP23526 432 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 CAPZA2P47755 286 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 MMP15P51511 669 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 MAZP56270 477 aaKnown RBP8.76□□□□□ -1.01
TRIM39-202ENST00000376659 SLC35D3Q5M8T2 416 aa8.76□□□□□ -1.01
TRIM39-202ENST00000376659 PAMR1Q6UXH9 720 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms