RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 AP1G1O43747 822 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 HMGCLP35914 325 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 KIR2DS3Q14952 304 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 CD163Q86VB7 1156 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 CLECL1Q8IZS7 167 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 GTF2H4Q92759 462 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 VN1R3Q9BXE9 311 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 SPO11Q9Y5K1 396 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 PUS1Q9Y606 427 aaKnown RBP eCLIP11.68□□□□□ -0.54
VPS13A-204ENST00000376634 CACNA1EQ15878 2313 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 COPS3Q9UNS2 423 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 ARFGEF1Q9Y6D6 1849 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 MTHFD2P13995 350 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 FAM57BQ71RH2 274 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 TMEM239Q8WW34 195 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 RGPD4Q7Z3J3 1758 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 ZNF701M0R085 212 aaPredicted RBP11.68□□□□□ -0.54
VPS13A-204ENST00000376634 OMGP23515 440 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 CPOXP36551 454 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 OPRL1P41146 370 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 IKZF1Q13422 519 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 SHEQ5VZ18 495 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 MKRN2Q9H000 416 aaKnown RBP11.68□□□□□ -0.54
VPS13A-204ENST00000376634 QPCTLQ9NXS2 382 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 UNCXA6NJT0 531 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 PRAMEF26H0Y7S4 382 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 BET1O15155 118 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 DRD1P21728 446 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 SIM1P81133 766 aaPredicted RBP11.68□□□□□ -0.54
VPS13A-204ENST00000376634 LTBQ06643 244 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 TAF9Q16594 264 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 APOOLQ6UXV4 268 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 SHISA6Q6ZSJ9 500 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 INTS12Q96CB8 462 aaKnown RBP11.68□□□□□ -0.54
VPS13A-204ENST00000376634 SLC2A13Q96QE2 648 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 HHLA2Q9UM44 414 aa11.68□□□□□ -0.54
VPS13A-204ENST00000376634 ICAM2P13598 275 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 SNCAP37840 140 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 RGNQ15493 299 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 SERPINA11Q86U17 422 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 GLIS1Q8NBF1 620 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 PIGCQ92535 297 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 MYOTQ9UBF9 498 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 NPIPA5A0A0B4J1W7 369 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 A0A0D9SG52 128 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 NPIPA7E9PJI5 369 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 FAM72CH0Y354 149 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 NPIPA8P0DM63 369 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 BMP2P12643 396 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 ACPPP15309 386 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 FAM72AQ5TYM5 149 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 HACD4Q5VWC8 232 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 FAM72DQ6L9T8 149 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 RFPL4BQ6ZWI9 263 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 FAM72BQ86X60 149 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 SERPINA12Q8IW75 414 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 SYT17Q9BSW7 474 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 ANKRD19PQ9H560 264 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 LIN7BQ9HAP6 207 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 IL26Q9NPH9 171 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 GDE1Q9NZC3 331 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 V9GY05 133 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 FBXO45P0C2W1 286 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 ITGAMP11215 1152 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 FUT1P19526 365 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 SELENOWP63302 87 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 TMEM244Q5VVB8 128 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 GLB1L2Q8IW92 636 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 SEMA6CQ9H3T2 930 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 TRAV27A0A087WT01 109 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 PRDX3P30048 256 aaKnown RBP11.67□□□□□ -0.54
VPS13A-204ENST00000376634 RAC1P63000 192 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 CTU1Q7Z7A3 348 aaKnown RBP11.67□□□□□ -0.54
VPS13A-204ENST00000376634 MMP21Q8N119 569 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 NETO1Q8TDF5 533 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 BPIFA2Q96DR5 249 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 ADOQ96SZ5 270 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 RBPJLQ9UBG7 517 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 HNRNPA2B1P22626 353 aaKnown RBP11.67□□□□□ -0.54
VPS13A-204ENST00000376634 DLX5P56178 289 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 DSC1Q08554 894 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 FJX1Q86VR8 437 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 SIMC1Q8NDZ2 872 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 LURAP1Q96LR2 239 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 SIX4Q9UIU6 781 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 ZNF281Q9Y2X9 895 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 SNED1Q8TER0 1413 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 ARAP2Q8WZ64 1704 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 ZNF587BE7ETH6 402 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 HBE1P02100 147 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 ANXA7P20073 488 aaKnown RBP11.67□□□□□ -0.54
VPS13A-204ENST00000376634 PSAPL1Q6NUJ1 521 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 NDUFAF7Q7L592 441 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 CMSS1Q9BQ75 279 aaKnown RBP11.67□□□□□ -0.54
VPS13A-204ENST00000376634 SLC6A17Q9H1V8 727 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 MARCH4Q9P2E8 410 aaPredicted RBP11.67□□□□□ -0.54
VPS13A-204ENST00000376634 ABCA4P78363 2273 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 NSG1A0A0A6YYJ2 146 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 DDAH2O95865 285 aa11.67□□□□□ -0.54
VPS13A-204ENST00000376634 PLPP5Q8NEB5 264 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms