RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 APOOLQ6UXV4 268 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 TMPRSS11FQ6ZWK6 438 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 PRSS42Q7Z5A4 293 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 ADGRG3Q86Y34 549 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 RNF113BQ8IZP6 322 aaKnown RBP12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 ZNF433Q8N7K0 673 aaPredicted RBP12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 OR52E2Q8NGJ4 325 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 OR4K13Q8NH42 304 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 ZNRF4Q8WWF5 429 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 WBP1Q96G27 269 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 RADILQ96JH8 1075 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 LINC00052Q96N35 136 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 GFI1Q99684 422 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 C7orf50Q9BRJ6 194 aaKnown RBP12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 ZCCHC4Q9H5U6 513 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 IL21RQ9HBE5 538 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 CAPN10Q9HC96 672 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 POT1Q9NUX5 634 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 PIPOXQ9P0Z9 390 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 MED31Q9Y3C7 131 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 FKBP7Q9Y680 259 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 TP53BP1Q12888 1972 aaPredicted RBP12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 TRBV2A0A0J9YWF9 115 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 IDSB3KWA1 339 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 K7EQS6 105 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 IMPA2O14732 288 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 OGG1O15527 345 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 STX11O75558 287 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 PLAURQ03405 335 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 CDK5R1Q15078 307 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 AMZ1Q400G9 498 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 EIPR1Q53HC9 387 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 SFRP5Q5T4F7 317 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 VN1R4Q7Z5H5 301 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 SLITRK4Q8IW52 837 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 OR2L13Q8N349 312 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 MFSD9Q8NBP5 474 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 FAM98AQ8NCA5 519 aaKnown RBP12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 RIT1Q92963 219 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 SMIM19Q96E16 107 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 ELMOD3Q96FG2 381 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 NOX4Q9NPH5 578 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 PRSS16Q9NQE7 514 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 LYARQ9NX58 379 aaKnown RBP12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 GNG8Q9UK08 70 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 A0A087WV48 116 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 TBC1D3EA0A087X179 549 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 ACOD1A6NK06 481 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 POM121CA8CG34 1229 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 GNB5O14775 395 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 ARL6IP5O75915 188 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 HOXD4P09016 255 aaPredicted RBP12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 UCHL1P09936 223 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 ANXA7P20073 488 aaKnown RBP12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 SIRPAP78324 504 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 DEFB134Q4QY38 66 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 UBE2NLQ5JXB2 153 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 DCST2Q5T1A1 773 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 FAM199XQ6PEV8 388 aaPredicted RBP12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 FCRLAQ7L513 359 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 ZNF619Q8N2I2 560 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 OR4E2Q8NGC2 313 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 MOSPD2Q8NHP6 518 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 PTCHD1Q96NR3 888 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 NPDC1Q9NQX5 325 aaPredicted RBP12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 THAP10Q9P2Z0 257 aaPredicted RBP12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 ZNF860A6NHJ4 632 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 PIN1P1O15428 100 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 SERPINA3P01011 423 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 ATP1B1P05026 303 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 THBS1P07996 1170 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 NGFRP08138 427 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 NID1P14543 1247 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 EDNRAP25101 427 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 MAT2AP31153 395 aaKnown RBP12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 DRD3P35462 400 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 GBX2P52951 348 aaPredicted RBP12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 RPS15P62841 145 aaKnown RBP12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 BTN1A1Q13410 526 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 IRF4Q15306 451 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 RPE65Q16518 533 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 ZC3H14Q6PJT7 736 aaKnown RBP12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 ZAR1Q86SH2 424 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 ZNF614Q8N883 585 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 OR4K14Q8NGD5 310 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 SNX33Q8WV41 574 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 CXorf58Q96LI9 332 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 GAS2L1Q99501 681 aaPredicted RBP12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 ZNF559Q9BR84 538 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 TEX101Q9BY14 249 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 ZNF350Q9GZX5 532 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 FKRPQ9H9S5 495 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 NOX3Q9HBY0 568 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 C12orf4Q9NQ89 552 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 ZNF69Q9UC07 566 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 SERGEFQ9UGK8 458 aa12.98□□□□□ -0.33
CLCNKA-202ENST00000375692 SPTBP11277 2137 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 CTDSPLO15194 276 aa12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 KHDRBS3O75525 346 aaKnown RBP12.97□□□□□ -0.33
CLCNKA-202ENST00000375692 TGM6O95932 706 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms