RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 RAP1AP62834 184 aa16.58■□□□□ 0.25
PTPDC1-202ENST00000375360 RAE1P78406 368 aaKnown RBP16.58■□□□□ 0.25
PTPDC1-202ENST00000375360 ZNF611Q8N823 705 aa16.58■□□□□ 0.25
PTPDC1-202ENST00000375360 OR1J4Q8NGS1 313 aa16.58■□□□□ 0.25
PTPDC1-202ENST00000375360 CCDC107Q8WV48 283 aa16.58■□□□□ 0.25
PTPDC1-202ENST00000375360 SGCDQ92629 289 aa16.58■□□□□ 0.25
PTPDC1-202ENST00000375360 RASD2Q96D21 266 aa16.58■□□□□ 0.25
PTPDC1-202ENST00000375360 CHST8Q9H2A9 424 aa16.58■□□□□ 0.25
PTPDC1-202ENST00000375360 WNT16Q9UBV4 365 aa16.58■□□□□ 0.25
PTPDC1-202ENST00000375360 TDRD15B5MCY1 1934 aaKnown RBP16.58■□□□□ 0.25
PTPDC1-202ENST00000375360 IGHV1OR15-9A0A0B4J2B8 117 aa16.58■□□□□ 0.24
PTPDC1-202ENST00000375360 EPOPA6NHQ4 379 aa16.58■□□□□ 0.24
PTPDC1-202ENST00000375360 PHYHO14832 338 aa16.58■□□□□ 0.24
PTPDC1-202ENST00000375360 P2RX6O15547 441 aa16.58■□□□□ 0.24
PTPDC1-202ENST00000375360 NME1P15531 152 aaKnown RBP16.58■□□□□ 0.24
PTPDC1-202ENST00000375360 ART1P52961 327 aa16.58■□□□□ 0.24
PTPDC1-202ENST00000375360 UBE2NP61088 152 aaKnown RBP16.58■□□□□ 0.24
PTPDC1-202ENST00000375360 ATAD3CQ5T2N8 411 aa16.58■□□□□ 0.24
PTPDC1-202ENST00000375360 GPR139Q6DWJ6 353 aa16.58■□□□□ 0.24
PTPDC1-202ENST00000375360 CNIH2Q6PI25 160 aa16.58■□□□□ 0.24
PTPDC1-202ENST00000375360 ESX1Q8N693 406 aa16.58■□□□□ 0.24
PTPDC1-202ENST00000375360 CCDC120Q96HB5 630 aa16.58■□□□□ 0.24
PTPDC1-202ENST00000375360 CACNG6Q9BXT2 260 aa16.58■□□□□ 0.24
PTPDC1-202ENST00000375360 FSCN3Q9NQT6 498 aa16.58■□□□□ 0.24
PTPDC1-202ENST00000375360 SCP2D1Q9UJQ7 156 aa16.58■□□□□ 0.24
PTPDC1-202ENST00000375360 TMA7Q9Y2S6 64 aaKnown RBP16.58■□□□□ 0.24
PTPDC1-202ENST00000375360 ABCA7Q8IZY2 2146 aa16.58■□□□□ 0.24
PTPDC1-202ENST00000375360 FXYD6-FXYD2A0A087WZ82 144 aa16.58■□□□□ 0.24
PTPDC1-202ENST00000375360 NRG2O14511 850 aaPredicted RBP16.58■□□□□ 0.24
PTPDC1-202ENST00000375360 ZNF432O94892 652 aa16.58■□□□□ 0.24
PTPDC1-202ENST00000375360 TOXO94900 526 aa16.58■□□□□ 0.24
PTPDC1-202ENST00000375360 FXYD6Q9H0Q3 95 aa16.58■□□□□ 0.24
PTPDC1-202ENST00000375360 LTBP1Q14766 1721 aa16.58■□□□□ 0.24
PTPDC1-202ENST00000375360 TMEM269A0A1B0GVZ9 245 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 ACOD1A6NK06 481 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 AGAP14A8MT82 685 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 SLC2A5P22732 501 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 OR4N2Q8NGD1 307 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 STACQ99469 402 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 SLC6A7Q99884 636 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 EML2O95834 649 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 FAM189A2Q15884 450 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 RAB11FIP2Q7L804 512 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 ABHD12BQ7Z5M8 362 aaPredicted RBP16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 ZNF584Q8IVC4 421 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 SFTPA2Q8IWL1 248 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 HOXB13Q92826 284 aaPredicted RBP16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 FAM46BQ96A09 425 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 ZNF578Q96N58 590 aaPredicted RBP16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 CENPOQ9BU64 300 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 ULBP2Q9BZM5 246 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 CDCP1Q9H5V8 836 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 RASD1Q9Y272 281 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 MRPS2Q9Y399 296 aaKnown RBP16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 TDRD6O60522 2096 aaKnown RBP16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 ICAM2P13598 275 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 STK11Q15831 433 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 LRRN1Q6UXK5 716 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 ANKRD13BQ86YJ7 626 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 URM1Q9BTM9 101 aaKnown RBP16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 KLHL9Q9P2J3 617 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 POU2F3Q9UKI9 436 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 SPTAN1Q13813 2472 aaKnown RBP16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 KCNE1BA0A087WTH5 132 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 IGHV5-51A0A0C4DH38 117 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 FPR3P25089 353 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 CAPZA1P52907 286 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 WNT3P56703 355 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 MRPL49Q13405 166 aaKnown RBP16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 NTRK2Q16620 822 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 LRRC37A5PQ49AS3 106 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 GSKIPQ9P0R6 139 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 CACNA1HO95180 2353 aa16.57■□□□□ 0.24
PTPDC1-202ENST00000375360 OR2A25A4D2G3 310 aa16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 YKT6O15498 198 aa16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 CHP2O43745 196 aa16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 MRPS14O60783 128 aaKnown RBP16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 PRAMEF4O60810 478 aa16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 PITPNBP48739 271 aa16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 POLR2HP52434 150 aaKnown RBP16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 RAB11BQ15907 218 aa16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 OCLNQ16625 522 aa16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 ARHGAP11BQ3KRB8 267 aa16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 PRAMEF9Q5VWM5 478 aa16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 SLC22A10Q63ZE4 541 aa16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 LRRC18Q8N456 261 aa16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 CNEP1R1Q8N9A8 125 aa16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 BOLLQ8N9W6 283 aaKnown RBP16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 ZG16BQ96DA0 208 aa16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 NXT1Q9UKK6 140 aaKnown RBP16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 A0A0A6YYD5 115 aa16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 GGT3PA6NGU5 568 aa16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 NCR1O76036 304 aa16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 CSNK2A1P68400 391 aaPredicted RBP16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 CTU2Q2VPK5 515 aaKnown RBP16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 CDNFQ49AH0 187 aa16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 KIAA0907Q7Z7F0 614 aaPredicted RBP16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 BCORP1Q8N888 145 aa16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 FNDC8Q8TC99 324 aa16.56■□□□□ 0.24
PTPDC1-202ENST00000375360 EMC6Q9BV81 110 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms