RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 KMT2EQ8IZD2 1858 aa16.39■□□□□ 0.21
HLA-DQB1-201ENST00000374943 WDR87Q6ZQQ6 2873 aa16.39■□□□□ 0.21
HLA-DQB1-201ENST00000374943 TRBV11-1A0A0K0K1C0 115 aa16.39■□□□□ 0.21
HLA-DQB1-201ENST00000374943 A0A1B0GVG6 124 aa16.39■□□□□ 0.21
HLA-DQB1-201ENST00000374943 ZC3H12DA2A288 527 aaKnown RBP16.39■□□□□ 0.21
HLA-DQB1-201ENST00000374943 TMEM200CA6NKL6 621 aa16.39■□□□□ 0.21
HLA-DQB1-201ENST00000374943 C12orf71A8MTZ7 269 aa16.39■□□□□ 0.21
HLA-DQB1-201ENST00000374943 WWP2O00308 870 aa16.39■□□□□ 0.21
HLA-DQB1-201ENST00000374943 HIST1H1CP16403 213 aaKnown RBP16.39■□□□□ 0.21
HLA-DQB1-201ENST00000374943 GABRA5P31644 462 aa16.39■□□□□ 0.21
HLA-DQB1-201ENST00000374943 TMPRSS11AQ6ZMR5 421 aa16.39■□□□□ 0.21
HLA-DQB1-201ENST00000374943 LRRC75AQ8NAA5 344 aa16.39■□□□□ 0.21
HLA-DQB1-201ENST00000374943 OR52E2Q8NGJ4 325 aa16.39■□□□□ 0.21
HLA-DQB1-201ENST00000374943 HGDQ93099 445 aa16.39■□□□□ 0.21
HLA-DQB1-201ENST00000374943 TRMT61AQ96FX7 289 aaKnown RBP16.39■□□□□ 0.21
HLA-DQB1-201ENST00000374943 DDOQ99489 341 aa16.39■□□□□ 0.21
HLA-DQB1-201ENST00000374943 SMOC1Q9H4F8 434 aa16.39■□□□□ 0.21
HLA-DQB1-201ENST00000374943 ADGRL4Q9HBW9 690 aa16.39■□□□□ 0.21
HLA-DQB1-201ENST00000374943 EXOSC4Q9NPD3 245 aaKnown RBP16.39■□□□□ 0.21
HLA-DQB1-201ENST00000374943 NANSQ9NR45 359 aa16.39■□□□□ 0.21
HLA-DQB1-201ENST00000374943 ZNF229Q9UJW7 825 aa16.39■□□□□ 0.21
HLA-DQB1-201ENST00000374943 LOC102723996A0A087X1L8 192 aa16.38■□□□□ 0.21
HLA-DQB1-201ENST00000374943 KHNYNO15037 678 aaKnown RBP16.38■□□□□ 0.21
HLA-DQB1-201ENST00000374943 FLRT2O43155 660 aa16.38■□□□□ 0.21
HLA-DQB1-201ENST00000374943 SCO2O43819 266 aa16.38■□□□□ 0.21
HLA-DQB1-201ENST00000374943 SBK2P0C263 348 aa16.38■□□□□ 0.21
HLA-DQB1-201ENST00000374943 BMP4P12644 408 aa16.38■□□□□ 0.21
HLA-DQB1-201ENST00000374943 GP1BBP13224 206 aa16.38■□□□□ 0.21
HLA-DQB1-201ENST00000374943 ZNF28P17035 718 aa16.38■□□□□ 0.21
HLA-DQB1-201ENST00000374943 ITPKBP27987 946 aa16.38■□□□□ 0.21
HLA-DQB1-201ENST00000374943 UQCRC1P31930 480 aa16.38■□□□□ 0.21
HLA-DQB1-201ENST00000374943 SOX6P35712 828 aa16.38■□□□□ 0.21
HLA-DQB1-201ENST00000374943 RPL4P36578 427 aaKnown RBP16.38■□□□□ 0.21
HLA-DQB1-201ENST00000374943 GGTLC2Q14390 218 aa16.38■□□□□ 0.21
HLA-DQB1-201ENST00000374943 ANGPT1Q15389 498 aa16.38■□□□□ 0.21
HLA-DQB1-201ENST00000374943 CD200R1LQ6Q8B3 271 aa16.38■□□□□ 0.21
HLA-DQB1-201ENST00000374943 IGFN1Q86VF2 1251 aa16.38■□□□□ 0.21
HLA-DQB1-201ENST00000374943 TMEM99Q8N816 258 aa16.38■□□□□ 0.21
HLA-DQB1-201ENST00000374943 CYB561A3Q8NBI2 242 aa16.38■□□□□ 0.21
HLA-DQB1-201ENST00000374943 B4GALNT2Q8NHY0 566 aa16.38■□□□□ 0.21
HLA-DQB1-201ENST00000374943 GPR119Q8TDV5 335 aa16.38■□□□□ 0.21
HLA-DQB1-201ENST00000374943 MOGAT1Q96PD6 335 aa16.38■□□□□ 0.21
HLA-DQB1-201ENST00000374943 DEPDC7Q96QD5 511 aa16.38■□□□□ 0.21
HLA-DQB1-201ENST00000374943 ASPNQ9BXN1 380 aa16.38■□□□□ 0.21
HLA-DQB1-201ENST00000374943 NDEL1Q9GZM8 345 aa16.38■□□□□ 0.21
HLA-DQB1-201ENST00000374943 OR51V1Q9H2C8 321 aa16.38■□□□□ 0.21
HLA-DQB1-201ENST00000374943 ARRDC1-AS1Q9H2J1 176 aa16.38■□□□□ 0.21
HLA-DQB1-201ENST00000374943 FKRPQ9H9S5 495 aa16.38■□□□□ 0.21
HLA-DQB1-201ENST00000374943 B4E171 279 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 J3QRK9 145 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 IMPA2O14732 288 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 ZNF354AO60765 605 aaPredicted RBP16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 ZFAND5O76080 213 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 LALBAP00709 142 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 KLK3P07288 261 aaPredicted RBP16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 CXCR1P25024 350 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 CCKBRP32239 447 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 TSPAN7P41732 249 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 RPS7P62081 194 aaKnown RBP16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 ACTC1P68032 377 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 ACTA1P68133 377 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 LTBQ06643 244 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 GALEQ14376 348 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 TOMM34Q15785 309 aaPredicted RBP16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 ZNF791Q3KP31 576 aaPredicted RBP16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 C16orf87Q6PH81 154 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 FAM198BQ6UWH4 519 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 FAM98AQ8NCA5 519 aaKnown RBP16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 SDR9C7Q8NEX9 313 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 OR4K13Q8NH42 304 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 SPRYD4Q8WW59 207 aaPredicted RBP16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 TTC9Q92623 222 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 TMCO6Q96DC7 493 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 KTI12Q96EK9 354 aaPredicted RBP16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 TIMP4Q99727 224 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 COQ7Q99807 217 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 ALG8Q9BVK2 526 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 TXNL4BQ9NX01 149 aaKnown RBP16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 GPN3Q9UHW5 284 aaPredicted RBP16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 ADAM18Q9Y3Q7 739 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 TRAV36DV7A0A075B6V5 113 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 SLC30A4O14863 429 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 PLD2O14939 933 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 GDF9O60383 454 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 TXNDC12O95881 172 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 CD14P08571 375 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 GAAP10253 952 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 CLUP10909 449 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 CCL4P13236 92 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 FGF9P31371 208 aaPredicted RBP16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 CAPZA2P47755 286 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 POLR2HP52434 150 aaKnown RBP16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 SUMO3P55854 103 aaPredicted RBP16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 RPS25P62851 125 aaKnown RBP16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 LGALS3BPQ08380 585 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 GPR50Q13585 617 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 IL10RAQ13651 578 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 QPRTQ15274 297 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 SLC35D3Q5M8T2 416 aa16.37■□□□□ 0.21
HLA-DQB1-201ENST00000374943 LCN1P1Q5VSP4 162 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms