RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 LOC102724200A0A096LPH7 203 aaPredicted RBP7.3□□□□□ -1.24
USP48-203ENST00000374732 C2orf72A6NCS6 295 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 A8MWP6 167 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 XRCC2O43543 280 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 ICOSLGO75144 302 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 TRUB2O95900 331 aaKnown RBP7.3□□□□□ -1.24
USP48-203ENST00000374732 MBPP02686 304 aaPredicted RBP7.3□□□□□ -1.24
USP48-203ENST00000374732 MT-ND1P03886 318 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 SELENOTP62341 195 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 IRX4P78413 519 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 SSBP2P81877 361 aaPredicted RBP7.3□□□□□ -1.24
USP48-203ENST00000374732 CDK6Q00534 326 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 RBBP4Q09028 425 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 ABHD18Q0P651 414 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 ZNF235Q14590 738 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 QPRTQ15274 297 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 NXNL2Q5VZ03 156 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 WDR25Q64LD2 544 aaPredicted RBP7.3□□□□□ -1.24
USP48-203ENST00000374732 LDB1Q86U70 411 aaPredicted RBP7.3□□□□□ -1.24
USP48-203ENST00000374732 UNC93AQ86WB7 457 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 ZNF280BQ86YH2 543 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 OR6V1Q8N148 313 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 AQP11Q8NBQ7 271 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 OR2AK2Q8NG84 335 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 OR4K2Q8NGD2 314 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 PIH1D2Q8WWB5 315 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 ZNF354BQ96LW1 612 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 ZNF778Q96MU6 729 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 ATF6BQ99941 703 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 NAA50Q9GZZ1 169 aaKnown RBP7.3□□□□□ -1.24
USP48-203ENST00000374732 FZD8Q9H461 694 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 PCIF1Q9H4Z3 704 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 NPIPA5A0A0B4J1W7 369 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 CPED1A4D0V7 1026 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 ZNF99A8MXY4 864 aaPredicted RBP7.3□□□□□ -1.24
USP48-203ENST00000374732 TRDCB7Z8K6 153 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 C5orf58C9J3I9 102 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 H0YGN5 161 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 TGFBR3LH3BV60 316 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 BHLHE40O14503 412 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 WNT11O96014 354 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 TGFB1P01137 390 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 LPLP06858 475 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 TRAPPC2P0DI81 140 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 TRAPPC2BP0DI82 140 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 HOXB2P14652 356 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 FDXRP22570 491 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 LGALS7P47929 136 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 KRT33BQ14525 404 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 ZNF234Q14588 700 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 RSU1Q15404 277 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 SMARCD3Q6STE5 483 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 CPEB2Q7Z5Q1 589 aaKnown RBP7.3□□□□□ -1.24
USP48-203ENST00000374732 GPD1LQ8N335 351 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 Q8N402 240 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 TXNDC5Q8NBS9 432 aaKnown RBP7.3□□□□□ -1.24
USP48-203ENST00000374732 OR10G3Q8NGC4 313 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 ST8SIA1Q92185 356 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 MIB2Q96AX9 1013 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 CCDC32Q9BV29 185 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 SIK2Q9H0K1 926 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 SRMSQ9H3Y6 488 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 TMEM9Q9P0T7 183 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 ZNF490Q9ULM2 529 aaPredicted RBP7.3□□□□□ -1.24
USP48-203ENST00000374732 ANGPT4Q9Y264 503 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 HCFC2Q9Y5Z7 792 aa7.3□□□□□ -1.24
USP48-203ENST00000374732 LCTP09848 1927 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 IGKV6D-21A0A0A0MT36 114 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 ANKRD63C9JTQ0 380 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 GNG7O60262 68 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 CST4P01036 141 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 ANOS1P23352 680 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 OMGP23515 440 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 HSD17B3P37058 310 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 MAGEA12P43365 314 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 MTNR1BP49286 362 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 RPL32P62910 135 aaKnown RBP7.29□□□□□ -1.24
USP48-203ENST00000374732 MXD1Q05195 221 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 MAD2L1Q13257 205 aaPredicted RBP7.29□□□□□ -1.24
USP48-203ENST00000374732 TRMT5Q32P41 509 aaKnown RBP7.29□□□□□ -1.24
USP48-203ENST00000374732 ZNF529Q6P280 563 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 SLC29A4Q7RTT9 530 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 OR9A4Q8NGU2 314 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 FCGR1BQ92637 280 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 FKBP10Q96AY3 582 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 ANKRD9Q96BM1 317 aaPredicted RBP7.29□□□□□ -1.24
USP48-203ENST00000374732 CELF6Q96J87 481 aaKnown RBP7.29□□□□□ -1.24
USP48-203ENST00000374732 F2RL3Q96RI0 385 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 PCDHB18PQ96TA0 734 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 MTERF1Q99551 399 aaKnown RBP7.29□□□□□ -1.24
USP48-203ENST00000374732 WRAP53Q9BUR4 548 aaKnown RBP7.29□□□□□ -1.24
USP48-203ENST00000374732 RAB11FIP5Q9BXF6 653 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 SPG21Q9NZD8 308 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 MARCH4Q9P2E8 410 aaPredicted RBP7.29□□□□□ -1.24
USP48-203ENST00000374732 FAM187AA6NFU0 413 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 ZNF785A8K8V0 405 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 TRIM49D1C9J1S8 452 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 PPP6CO00743 305 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 PRKCGP05129 697 aa7.29□□□□□ -1.24
USP48-203ENST00000374732 G6PDP11413 515 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms