RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 ZNF74Q16587 644 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 ZNF362Q5T0B9 420 aaPredicted RBP7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 FAM69AQ5T7M9 428 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 HBMQ6B0K9 141 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 DMKNQ6E0U4 476 aaPredicted RBP7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 MZT2BQ6NZ67 158 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 DGAT2L6Q6ZPD8 337 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 SLC16A9Q7RTY1 509 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 OVCH1Q7RTY7 1134 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 DGLUCYQ7Z3D6 616 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 WDR53Q7Z5U6 358 aaPredicted RBP7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 PXKQ7Z7A4 578 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 JAZF1Q86VZ6 243 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 LRRC28Q86X40 367 aaPredicted RBP7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 ZNF761Q86XN6 746 aaPredicted RBP7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 GATAD2AQ86YP4 633 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 TMEFF1Q8IYR6 380 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 CADM2Q8N3J6 435 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 EID2Q8N6I1 236 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 SCAIQ8N9R8 606 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 ZNF248Q8NDW4 579 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 OR51G2Q8NGK0 314 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 OR13C2Q8NGS9 318 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 OR51A7Q8NH64 312 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 MOSPD2Q8NHP6 518 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 PFN4Q8NHR9 129 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 ZNF563Q8TA94 476 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 SNIP1Q8TAD8 396 aaKnown RBP7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 PHOSPHO1Q8TCT1 267 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 GRHL3Q8TE85 626 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 SAP25Q8TEE9 199 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 SMPDL3BQ92485 455 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 TM9SF4Q92544 642 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 KISS1RQ969F8 398 aaPredicted RBP7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 ABTB1Q969K4 478 aaPredicted RBP7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 EFHD2Q96C19 240 aaPredicted RBP7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 SMIM19Q96E16 107 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 DDOQ99489 341 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 CTRCQ99895 268 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 KATNB1Q9BVA0 655 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 FOXQ1Q9C009 403 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 WWTR1Q9GZV5 400 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 ADGRL4Q9HBW9 690 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 MMP25Q9NPA2 562 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 ATP13A2Q9NQ11 1180 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 PNO1Q9NRX1 252 aaKnown RBP7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 SNTG1Q9NSN8 517 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 FBXO34Q9NWN3 711 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 IL20RAQ9UHF4 553 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 PILRBQ9UKJ0 227 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 FBXO4Q9UKT5 387 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 ATG2BQ96BY7 2078 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 CEP290O15078 2479 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 NINQ8N4C6 2090 aa7.96□□□□□ -1.13
SNRNP40-202ENST00000373720 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 A0A1B0GVT2 93 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 CCDC182A6NF36 153 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 A6NIZ1 184 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 VSTM2BA6NLU5 285 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 M0R129 80 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 GABRPO00591 440 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 PIP5K1CO60331 668 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 FZD7O75084 574 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 REM1O75628 298 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 CH25HO95992 272 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 IGHMP01871 453 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 HLA-DQB1P01920 261 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 GIMD1P0DJR0 217 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 FGF5P12034 268 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 NR2C1P13056 603 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 SNRPBP14678 240 aaKnown RBP7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 ADH6P28332 368 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 UQCRC1P31930 480 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 PTGER1P34995 402 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 RAP1BP61224 184 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 RPS3AP61247 264 aaKnown RBP7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 RAP1AP62834 184 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 SIRPAP78324 504 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 MAT1AQ00266 395 aaKnown RBP7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 ZP4Q12836 540 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 ASAH1Q13510 395 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 FHL1Q13642 323 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 CRMP1Q14194 572 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 TAB1Q15750 504 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 SGCBQ16585 318 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 GLYR1Q49A26 553 aaPredicted RBP7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 KLHL12Q53G59 568 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 HSD17B12Q53GQ0 312 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 YIF1BQ5BJH7 314 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 ALG10Q5BKT4 473 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 C22orf42Q6IC83 251 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 DNM1P34Q6PK57 102 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 OLIG3Q7RTU3 272 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 KANSL1Q7Z3B3 1105 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 FAM220AQ7Z4H9 259 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 NANOGNBQ7Z5D8 188 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 LHFPL3Q86UP9 236 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 PPP1R3BQ86XI6 285 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 FRMD1Q8N878 549 aa7.96□□□□□ -1.14
SNRNP40-202ENST00000373720 POC5Q8NA72 575 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms