RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 HOXA9P31269 272 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 OR2B8PP59922 312 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 GBX1Q14549 363 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 PSAPL1Q6NUJ1 521 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 FIGLAQ6QHK4 219 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 UNC5DQ6UXZ4 953 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 OR6V1Q8N148 313 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 GPR119Q8TDV5 335 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 DCBLD2Q96PD2 775 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 PIP5K1AQ99755 562 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 RAB18Q9NP72 206 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 ABRACLQ9P1F3 81 aa13.16□□□□□ -0.3
RAPGEF1-202ENST00000372190 ZIC2O95409 532 aaPredicted RBP13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 HLA-AP01891 365 aaKnown RBP13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 CAPNS1P04632 268 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 DMWDQ09019 674 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 DPPA4Q7L190 304 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 TSPYL5Q86VY4 417 aaPredicted RBP13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 FAM217AQ8IXS0 508 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 ISG20Q96AZ6 181 aaKnown RBP13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 INTS12Q96CB8 462 aaKnown RBP13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 TSSK2Q96PF2 358 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 TRIB3Q96RU7 358 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 SRA1Q9HD15 236 aaKnown RBP13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 RHCGQ9UBD6 479 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 FOLR1P15328 257 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 CLRN1P58418 232 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 DEFB134Q4QY38 66 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 ALKAL1Q6UXT8 129 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 PIWIL3Q7Z3Z3 882 aaKnown RBP13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 RNF130Q86XS8 419 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 ADAMTS16Q8TE57 1224 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 C20orf24Q9BUV8 137 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 C12orf10Q9HB07 376 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 FEZF1A0PJY2 475 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 XRCC3O43542 346 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 KRTDAPP60985 99 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 SLC10A2Q12908 348 aaPredicted RBP13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 EBPQ15125 230 aaKnown RBP13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 IRF4Q15306 451 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 TMPRSS9Q7Z410 1059 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 SLC2A12Q8TD20 617 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 PKMYT1Q99640 499 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 TIAM2Q8IVF5 1701 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 PRSS51A0A1B0GVH4 220 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 DPM1O60762 260 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 PDGFBP01127 241 aaPredicted RBP13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 HMGCLP35914 325 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 TMEM183BQ1AE95 376 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 CYP27C1Q4G0S4 372 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 VASNQ6EMK4 673 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 SULF2Q8IWU5 870 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 NANOS1Q8WY41 292 aaKnown RBP13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 MACROD1Q9BQ69 325 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 MAGIXQ9H6Y5 334 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 SIAEQ9HAT2 523 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 GPR83Q9NYM4 423 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 IL20RAQ9UHF4 553 aa13.15□□□□□ -0.3
RAPGEF1-202ENST00000372190 H7BYZ3 331 aa13.15□□□□□ -0.31
RAPGEF1-202ENST00000372190 SOCS2O14508 198 aa13.15□□□□□ -0.31
RAPGEF1-202ENST00000372190 OR13C7P0DN81 318 aa13.15□□□□□ -0.31
RAPGEF1-202ENST00000372190 PRDX3P30048 256 aaKnown RBP13.15□□□□□ -0.31
RAPGEF1-202ENST00000372190 CRYZQ08257 329 aaKnown RBP13.15□□□□□ -0.31
RAPGEF1-202ENST00000372190 OR2T2Q6IF00 324 aa13.15□□□□□ -0.31
RAPGEF1-202ENST00000372190 ETV3LQ6ZN32 361 aa13.15□□□□□ -0.31
RAPGEF1-202ENST00000372190 OR4N5Q8IXE1 308 aa13.15□□□□□ -0.31
RAPGEF1-202ENST00000372190 OR5L2Q8NGL0 311 aa13.15□□□□□ -0.31
RAPGEF1-202ENST00000372190 OR13C9Q8NGT0 318 aa13.15□□□□□ -0.31
RAPGEF1-202ENST00000372190 GSX2Q9BZM3 304 aa13.15□□□□□ -0.31
RAPGEF1-202ENST00000372190 ACOXLQ9NUZ1 547 aa13.15□□□□□ -0.31
RAPGEF1-202ENST00000372190 MYH4Q9Y623 1939 aa13.14□□□□□ -0.31
RAPGEF1-202ENST00000372190 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.14□□□□□ -0.31
RAPGEF1-202ENST00000372190 A8MVM7 634 aa13.14□□□□□ -0.31
RAPGEF1-202ENST00000372190 MPPED1O15442 326 aa13.14□□□□□ -0.31
RAPGEF1-202ENST00000372190 EEDO75530 441 aaKnown RBP13.14□□□□□ -0.31
RAPGEF1-202ENST00000372190 ZNF25P17030 456 aaPredicted RBP13.14□□□□□ -0.31
RAPGEF1-202ENST00000372190 DDOSTP39656 456 aa13.14□□□□□ -0.31
RAPGEF1-202ENST00000372190 TAS2R19P59542 299 aa13.14□□□□□ -0.31
RAPGEF1-202ENST00000372190 KCTD11Q693B1 232 aa13.14□□□□□ -0.31
RAPGEF1-202ENST00000372190 LARP4Q71RC2 724 aaKnown RBP eCLIP13.14□□□□□ -0.31
RAPGEF1-202ENST00000372190 KLHDC8BQ8IXV7 354 aa13.14□□□□□ -0.31
RAPGEF1-202ENST00000372190 ADAMTS18Q8TE60 1221 aa13.14□□□□□ -0.31
RAPGEF1-202ENST00000372190 BCL7CQ8WUZ0 217 aaPredicted RBP13.14□□□□□ -0.31
RAPGEF1-202ENST00000372190 NAT6Q93015 286 aa13.14□□□□□ -0.31
RAPGEF1-202ENST00000372190 ANKRD60Q9BZ19 345 aa13.14□□□□□ -0.31
RAPGEF1-202ENST00000372190 PLCXD2Q0VAA5 305 aa13.14□□□□□ -0.31
RAPGEF1-202ENST00000372190 CDKN3Q16667 212 aa13.14□□□□□ -0.31
RAPGEF1-202ENST00000372190 C18orf63Q68DL7 685 aa13.14□□□□□ -0.31
RAPGEF1-202ENST00000372190 SLC6A19Q695T7 634 aa13.14□□□□□ -0.31
RAPGEF1-202ENST00000372190 HACD2Q6Y1H2 254 aa13.14□□□□□ -0.31
RAPGEF1-202ENST00000372190 PARS2Q7L3T8 475 aaKnown RBP13.14□□□□□ -0.31
RAPGEF1-202ENST00000372190 TCTEX1D1Q8N7M0 179 aa13.14□□□□□ -0.31
RAPGEF1-202ENST00000372190 ZFP41Q8N8Y5 198 aa13.14□□□□□ -0.31
RAPGEF1-202ENST00000372190 RHOXF1Q8NHV9 184 aa13.14□□□□□ -0.31
RAPGEF1-202ENST00000372190 CXXC1Q9P0U4 656 aaPredicted RBP13.14□□□□□ -0.31
RAPGEF1-202ENST00000372190 B4GAT1O43505 415 aa13.14□□□□□ -0.31
RAPGEF1-202ENST00000372190 NAA10P41227 235 aaPredicted RBP13.14□□□□□ -0.31
RAPGEF1-202ENST00000372190 FAM69BQ5VUD6 431 aa13.14□□□□□ -0.31
RAPGEF1-202ENST00000372190 NPWQ8N729 165 aa13.14□□□□□ -0.31
RAPGEF1-202ENST00000372190 FAM174AQ8TBP5 190 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms