RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.84■□□□□ 0.61
VEGFA-204ENST00000372064 RNF31Q96EP0 1072 aa18.84■□□□□ 0.61
VEGFA-204ENST00000372064 GPX7Q96SL4 187 aaPredicted RBP18.84■□□□□ 0.61
VEGFA-204ENST00000372064 TTTY10Q9BZA0 68 aa18.84■□□□□ 0.61
VEGFA-204ENST00000372064 NMNAT2Q9BZQ4 307 aa18.84■□□□□ 0.61
VEGFA-204ENST00000372064 PNO1Q9NRX1 252 aaKnown RBP18.84■□□□□ 0.61
VEGFA-204ENST00000372064 EPHA6Q9UF33 1036 aa18.84■□□□□ 0.61
VEGFA-204ENST00000372064 GMEB2Q9UKD1 530 aa18.84■□□□□ 0.61
VEGFA-204ENST00000372064 CLCA3PQ9Y6N3 262 aa18.84■□□□□ 0.61
VEGFA-204ENST00000372064 HTR3EA5X5Y0 456 aa18.83■□□□□ 0.61
VEGFA-204ENST00000372064 A8MUA0 341 aa18.83■□□□□ 0.61
VEGFA-204ENST00000372064 FAM25AB3EWG3 89 aa18.83■□□□□ 0.61
VEGFA-204ENST00000372064 FAM25CB3EWG5 89 aa18.83■□□□□ 0.61
VEGFA-204ENST00000372064 FAM25GB3EWG6 89 aa18.83■□□□□ 0.61
VEGFA-204ENST00000372064 ACVR1BP36896 505 aa18.83■□□□□ 0.61
VEGFA-204ENST00000372064 HCCSP53701 268 aa18.83■□□□□ 0.61
VEGFA-204ENST00000372064 CDONQ4KMG0 1287 aa18.83■□□□□ 0.61
VEGFA-204ENST00000372064 C14orf28Q4W4Y0 310 aa18.83■□□□□ 0.61
VEGFA-204ENST00000372064 MED25Q71SY5 747 aa18.83■□□□□ 0.61
VEGFA-204ENST00000372064 OR14A16Q8NHC5 309 aa18.83■□□□□ 0.61
VEGFA-204ENST00000372064 PTPMT1Q8WUK0 201 aaPredicted RBP18.83■□□□□ 0.61
VEGFA-204ENST00000372064 GHSRQ92847 366 aa18.83■□□□□ 0.61
VEGFA-204ENST00000372064 UBE2ZQ9H832 354 aaPredicted RBP18.83■□□□□ 0.61
VEGFA-204ENST00000372064 EXTL2Q9UBQ6 330 aa18.83■□□□□ 0.61
VEGFA-204ENST00000372064 LAMA1P25391 3075 aa18.83■□□□□ 0.6
VEGFA-204ENST00000372064 ALAS2P22557 587 aa18.83■□□□□ 0.6
VEGFA-204ENST00000372064 DIO1P49895 249 aa18.83■□□□□ 0.6
VEGFA-204ENST00000372064 OR10A3P58181 314 aa18.83■□□□□ 0.6
VEGFA-204ENST00000372064 HNRNPKP61978 463 aaKnown RBP eCLIP18.83■□□□□ 0.68e-7■■■■□ 21.9
VEGFA-204ENST00000372064 CCDC85BQ15834 202 aaPredicted RBP18.83■□□□□ 0.6
VEGFA-204ENST00000372064 BCL2A1Q16548 175 aa18.83■□□□□ 0.6
VEGFA-204ENST00000372064 ACSM3Q53FZ2 586 aa18.83■□□□□ 0.6
VEGFA-204ENST00000372064 HSPA12BQ96MM6 686 aa18.83■□□□□ 0.6
VEGFA-204ENST00000372064 N6AMT1Q9Y5N5 214 aa18.83■□□□□ 0.6
VEGFA-204ENST00000372064 RHPN2P1A8MT19 583 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 H3BMH7 237 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 PRKAR1AP10644 381 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 POU3F3P20264 500 aaPredicted RBP18.82■□□□□ 0.6
VEGFA-204ENST00000372064 SLC37A1P57057 533 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 QPRTQ15274 297 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 SF3A2Q15428 464 aaKnown RBP18.82■□□□□ 0.6
VEGFA-204ENST00000372064 CD226Q15762 336 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 SLC35D3Q5M8T2 416 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 PRAMEF17Q5VTA0 474 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 MZT2BQ6NZ67 158 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 OGFOD3Q6PK18 319 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 GHDCQ8N2G8 530 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 PELI1Q96FA3 418 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 ENAMQ9NRM1 1142 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 UBQLN4Q9NRR5 601 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 CUTCQ9NTM9 273 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 OIP5O43482 229 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 IDH3BO43837 385 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 RPL4P36578 427 aaKnown RBP18.82■□□□□ 0.6
VEGFA-204ENST00000372064 LGALS3BPQ08380 585 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 SKP2Q13309 424 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 TP53I3Q53FA7 332 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 WBP2NLQ6ICG8 309 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 SLITRK4Q8IW52 837 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 SLC35F2Q8IXU6 374 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 UBE2J2Q8N2K1 259 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 ZNRF4Q8WWF5 429 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 LIPHQ8WWY8 451 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 TSLPQ969D9 159 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 SMIM19Q96E16 107 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 ZDHHC12Q96GR4 267 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 EXOSC3Q9NQT5 275 aaKnown RBP18.82■□□□□ 0.6
VEGFA-204ENST00000372064 RASD1Q9Y272 281 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 RNF215Q9Y6U7 377 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 MYO15AQ9UKN7 3530 aa18.82■□□□□ 0.6
VEGFA-204ENST00000372064 LYRM1O43325 122 aa18.81■□□□□ 0.6
VEGFA-204ENST00000372064 IL33O95760 270 aa18.81■□□□□ 0.6
VEGFA-204ENST00000372064 CD1AP06126 327 aa18.81■□□□□ 0.6
VEGFA-204ENST00000372064 CSNK1EP49674 416 aaKnown RBP18.81■□□□□ 0.6
VEGFA-204ENST00000372064 NXPH1P58417 271 aa18.81■□□□□ 0.6
VEGFA-204ENST00000372064 PRPS1P60891 318 aa18.81■□□□□ 0.6
VEGFA-204ENST00000372064 CDK5R1Q15078 307 aa18.81■□□□□ 0.6
VEGFA-204ENST00000372064 PON3Q15166 354 aa18.81■□□□□ 0.6
VEGFA-204ENST00000372064 ATG4DQ86TL0 474 aaPredicted RBP18.81■□□□□ 0.6
VEGFA-204ENST00000372064 ZNF527Q8NB42 609 aa18.81■□□□□ 0.6
VEGFA-204ENST00000372064 CADM4Q8NFZ8 388 aa18.81■□□□□ 0.6
VEGFA-204ENST00000372064 DHCR7Q9UBM7 475 aaKnown RBP18.81■□□□□ 0.6
VEGFA-204ENST00000372064 ASXL3Q9C0F0 2248 aa18.81■□□□□ 0.6
VEGFA-204ENST00000372064 TRAV1-2A0A0B4J238 106 aa18.81■□□□□ 0.6
VEGFA-204ENST00000372064 IMPA2O14732 288 aa18.81■□□□□ 0.6
VEGFA-204ENST00000372064 MAGEB4O15481 346 aaPredicted RBP18.81■□□□□ 0.6
VEGFA-204ENST00000372064 OR2B3O76000 313 aa18.81■□□□□ 0.6
VEGFA-204ENST00000372064 SERPINA3P01011 423 aa18.81■□□□□ 0.6
VEGFA-204ENST00000372064 EIF4EP06730 217 aaKnown RBP18.81■□□□□ 0.6
VEGFA-204ENST00000372064 PNMTP11086 282 aa18.81■□□□□ 0.6
VEGFA-204ENST00000372064 NPR2P20594 1047 aa18.81■□□□□ 0.6
VEGFA-204ENST00000372064 RBMS1P29558 406 aaKnown RBP18.81■□□□□ 0.6
VEGFA-204ENST00000372064 OR1D5P58170 312 aa18.81■□□□□ 0.6
VEGFA-204ENST00000372064 IFITM2Q01629 132 aa18.81■□□□□ 0.6
VEGFA-204ENST00000372064 TBRG1Q3YBR2 411 aa18.81■□□□□ 0.6
VEGFA-204ENST00000372064 SLC7A6Q92536 515 aa18.81■□□□□ 0.6
VEGFA-204ENST00000372064 NMNAT3Q96T66 252 aa18.81■□□□□ 0.6
VEGFA-204ENST00000372064 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.81■□□□□ 0.63e-8■■□□□ 12.3
VEGFA-204ENST00000372064 NXF5Q9H1B4 397 aaKnown RBP18.81■□□□□ 0.6
VEGFA-204ENST00000372064 A0A0G2JMP0 313 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms