RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 RGMBQ6NW40 437 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 OR51I2Q9H344 312 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 CRLF2Q9HC73 371 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 TMEM212A6NML5 194 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 F5H5K5 113 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 STAG3L2P0CL84 134 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 PTBP1P26599 531 aaKnown RBP eCLIP14.32□□□□□ -0.12
COL5A1-201ENST00000371817 ZNF154Q13106 437 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 SLC5A12Q1EHB4 618 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 MS4A13Q5J8X5 152 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 TMEM244Q5VVB8 128 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 SFXN4Q6P4A7 337 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 LRIG1Q96JA1 1093 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 CUTCQ9NTM9 273 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 SCML1Q9UN30 329 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 SLC22A7Q9Y694 548 aa14.32□□□□□ -0.12
COL5A1-201ENST00000371817 TSPAN6O43657 245 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 RAD1O60671 282 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 RAB13P51153 203 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 CATSPERGQ6ZRH7 1159 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 LGALS14Q8TCE9 139 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 UBL4AP11441 157 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 RGNQ15493 299 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 VWA1Q6PCB0 445 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 RBMXL3Q8N7X1 1067 aaKnown RBP14.31□□□□□ -0.12
COL5A1-201ENST00000371817 OR4F15Q8NGB8 312 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 WFIKKN2Q8TEU8 576 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 GINS3Q9BRX5 216 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 PTPRUQ92729 1446 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 RFPL4AA6NLU0 287 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 FAM171A2A8MVW0 826 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 RFPL4AL1F8VTS6 287 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 PEX12O00623 359 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 NME2P1O60361 137 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 VNN1O95497 513 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 ACKR3P25106 362 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 CARD18P57730 90 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 MEPCEQ7L2J0 689 aaKnown RBP14.31□□□□□ -0.12
COL5A1-201ENST00000371817 ZNF100Q8IYN0 542 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 HSD17B11Q8NBQ5 300 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 UBL7Q96S82 380 aaPredicted RBP14.31□□□□□ -0.12
COL5A1-201ENST00000371817 GMPR2Q9P2T1 348 aaKnown RBP14.31□□□□□ -0.12
COL5A1-201ENST00000371817 KIAA1324LA8MWY0 1029 aaPredicted RBP14.31□□□□□ -0.12
COL5A1-201ENST00000371817 WNT10BO00744 389 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 LCATP04180 440 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 HRH2P25021 359 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 CCKARP32238 428 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 STEAP1BQ6NZ63 245 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 FBXL22Q6P050 247 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 CTRCQ99895 268 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 INIPQ9NRY2 104 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 OR10J4P0C629 311 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 JMJD7P0C870 316 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 IDUAP35475 653 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 ACOT7LQ6ZUV0 252 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 ESRP2Q9H6T0 727 aaKnown RBP14.31□□□□□ -0.12
COL5A1-201ENST00000371817 BET1LQ9NYM9 111 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 HS3ST4Q9Y661 456 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 GABARAPH6UMI1 98 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 GABARAPO95166 117 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 DTYMKP23919 212 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 RHBDL3P58872 404 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 PLCXD2Q0VAA5 305 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 FUT2Q10981 343 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 AANATQ16613 207 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 CLECL1Q8IZS7 167 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 MYADMQ96S97 322 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 KCNG2Q9UJ96 466 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 Q1RN00 199 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 CATSPEREQ5SY80 951 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 SLC38A6Q8IZM9 456 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 M1APQ8TC57 530 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 GOLT1BQ9Y3E0 138 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 ATG2BQ96BY7 2078 aa14.31□□□□□ -0.12
COL5A1-201ENST00000371817 NAV1Q8NEY1 1877 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 ADH1BP00325 375 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 HAGHQ16775 308 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 LARP4Q71RC2 724 aaKnown RBP eCLIP14.3□□□□□ -0.12
COL5A1-201ENST00000371817 ABHD12BQ7Z5M8 362 aaPredicted RBP14.3□□□□□ -0.12
COL5A1-201ENST00000371817 PPP1R35Q8TAP8 253 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 DAZLQ92904 295 aaKnown RBP14.3□□□□□ -0.12
COL5A1-201ENST00000371817 BORCS6Q96GS4 357 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 NKX3-1Q99801 234 aaPredicted RBP14.3□□□□□ -0.12
COL5A1-201ENST00000371817 HOXD1Q9GZZ0 328 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 OR1A2Q9Y585 309 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 LYRM7Q5U5X0 104 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 SYT13Q7L8C5 426 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 MED18Q9BUE0 208 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 SPNS1Q9H2V7 528 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 TARBP1Q13395 1621 aaKnown RBP14.3□□□□□ -0.12
COL5A1-201ENST00000371817 SCN1AP35498 2009 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 POM121BA6NF01 834 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 DPP4P27487 766 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 HOXA1P49639 335 aaPredicted RBP14.3□□□□□ -0.12
COL5A1-201ENST00000371817 RABGGTBP53611 331 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 RNF111Q6ZNA4 994 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 ASB17Q8WXJ9 295 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 A0A087X0M5 115 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 A0A1B0GX30 115 aa14.3□□□□□ -0.12
COL5A1-201ENST00000371817 HIST1H3AP68431 136 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms