RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 SAP130Q9H0E3 1048 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 RHBGQ9H310 441 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 OSGEPL1Q9H4B0 414 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 GPR160Q9UJ42 338 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 LEF1Q9UJU2 399 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-204ENST00000369530 GAB2Q9UQC2 676 aa6.32□□□□□ -1.4
CSDE1-204ENST00000369530 MRPS2Q9Y399 296 aaKnown RBP6.32□□□□□ -1.4
CSDE1-204ENST00000369530 DNHD1Q96M86 4753 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 MAP1BP46821 2468 aaKnown RBP6.31□□□□□ -1.4
CSDE1-204ENST00000369530 PHF3Q92576 2039 aaKnown RBP6.31□□□□□ -1.4
CSDE1-204ENST00000369530 A0A1B0GV90 55 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 TLCD2A6NGC4 264 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 MARCH11A6NNE9 402 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 ARHGEF33A8MVX0 844 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 MCIDASD6RGH6 385 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 TGFBR3LH3BV60 316 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 WWP2O00308 870 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 ATG12O94817 140 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 CHRM5P08912 532 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-204ENST00000369530 PRG2P13727 222 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 UQCRC2P22695 453 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 FPR3P25089 353 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 PTGFRP43088 359 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 DAPP51397 102 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 PPP3R1P63098 170 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 HMGCS1Q01581 520 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 SGCGQ13326 291 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 GTF2H3Q13889 308 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 HABP2Q14520 560 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-204ENST00000369530 FRMPD2BQ6IN97 320 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 SPESP1Q6UW49 350 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 SLC16A13Q7RTY0 426 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 COMTD1Q86VU5 262 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 OR5M9Q8NGP3 310 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 OTULINQ96BN8 352 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 ZNF354BQ96LW1 612 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 WDR54Q9H977 334 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 OR6C2Q9NZP2 312 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 PPP4R1LQ9P1A2 415 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 ZNF69Q9UC07 566 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 CABIN1Q9Y6J0 2220 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 ACOD1A6NK06 481 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 ULK1O75385 1050 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 STK16O75716 305 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 PLATP00750 562 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 CST1P01037 141 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 IFI6P09912 130 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 DEFA6Q01524 100 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 C1orf61Q13536 156 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 RHBDD2Q6NTF9 364 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 ERICH5Q6P6B1 374 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 RASSF6Q6ZTQ3 369 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 POMGNT2Q8NAT1 580 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 NFAM1Q8NET5 270 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-204ENST00000369530 RHEBL1Q8TAI7 183 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 TMEM163Q8TC26 289 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 ASPNQ9BXN1 380 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 SLC6A16Q9GZN6 736 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 METTL9Q9H1A3 318 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 MED28Q9H204 178 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 CRLF2Q9HC73 371 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 NDUFB11Q9NX14 153 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 ZIM2Q9NZV7 527 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 MED11Q9P086 117 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 PRKAB1Q9Y478 270 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 TRBV23-1A0A0A0MS06 115 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 A0A1B0GTL3 188 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 OR52A4PA6NMU1 304 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 TTLL8A6PVC2 850 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 FZD7O75084 574 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 OTCP00480 354 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 MT-ND1P03886 318 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 LIFP15018 202 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 NCK1P16333 377 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 SLC3A1Q07837 685 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 KLHL26Q53HC5 615 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 ACER2Q5QJU3 275 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 TMEM220Q6QAJ8 160 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 ANKRD46Q86W74 232 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 KCNS3Q9BQ31 491 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 EXOSC3Q9NQT5 275 aaKnown RBP6.31□□□□□ -1.4
CSDE1-204ENST00000369530 C1GALT1Q9NS00 363 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 DCAF13Q9NV06 445 aaKnown RBP6.31□□□□□ -1.4
CSDE1-204ENST00000369530 AIG1Q9NVV5 245 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 NDUFAF4Q9P032 175 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 AKAP7Q9P0M2 348 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-204ENST00000369530 HCN3Q9P1Z3 774 aa6.31□□□□□ -1.4
CSDE1-204ENST00000369530 POLR3HQ9Y535 204 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-204ENST00000369530 FEZF1A0PJY2 475 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 FABP12A6NFH5 140 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 RFPL4AA6NLU0 287 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 HMSDA8MTL9 139 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 RFPL4AL1F8VTS6 287 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 K7EM74 188 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 ADAMDEC1O15204 470 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 MITFO75030 526 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-204ENST00000369530 LRATO95237 230 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 AGAP20933 346 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 KIR3DL2P43630 455 aa6.3□□□□□ -1.4
CSDE1-204ENST00000369530 HTR6P50406 440 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms