RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 HRASLS5Q96KN8 279 aa11.12□□□□□ -0.63
TUBE1-202ENST00000368662 NPAS1Q99742 590 aa11.12□□□□□ -0.63
TUBE1-202ENST00000368662 FKRPQ9H9S5 495 aa11.12□□□□□ -0.63
TUBE1-202ENST00000368662 NANSQ9NR45 359 aa11.12□□□□□ -0.63
TUBE1-202ENST00000368662 RPH3AQ9Y2J0 694 aaPredicted RBP11.12□□□□□ -0.63
TUBE1-202ENST00000368662 CDH10Q9Y6N8 788 aa11.12□□□□□ -0.63
TUBE1-202ENST00000368662 OR2M5A3KFT3 312 aa11.12□□□□□ -0.63
TUBE1-202ENST00000368662 BCKDKO14874 412 aa11.12□□□□□ -0.63
TUBE1-202ENST00000368662 PRPS1P60891 318 aa11.12□□□□□ -0.63
TUBE1-202ENST00000368662 RAC1P63000 192 aa11.12□□□□□ -0.63
TUBE1-202ENST00000368662 ZNF169Q14929 603 aaPredicted RBP11.12□□□□□ -0.63
TUBE1-202ENST00000368662 PTGES3Q15185 160 aaKnown RBP11.12□□□□□ -0.63
TUBE1-202ENST00000368662 ZBED5Q49AG3 693 aa11.12□□□□□ -0.63
TUBE1-202ENST00000368662 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.12□□□□□ -0.63
TUBE1-202ENST00000368662 SETD9Q8NE22 299 aa11.12□□□□□ -0.63
TUBE1-202ENST00000368662 OR52L1Q8NGH7 329 aa11.12□□□□□ -0.63
TUBE1-202ENST00000368662 FANK1Q8TC84 345 aa11.12□□□□□ -0.63
TUBE1-202ENST00000368662 TAAR8Q969N4 342 aa11.12□□□□□ -0.63
TUBE1-202ENST00000368662 APOL4Q9BPW4 351 aa11.12□□□□□ -0.63
TUBE1-202ENST00000368662 TEX12Q9BXU0 123 aa11.12□□□□□ -0.63
TUBE1-202ENST00000368662 NDEL1Q9GZM8 345 aa11.12□□□□□ -0.63
TUBE1-202ENST00000368662 NDRG4Q9ULP0 352 aaKnown RBP11.12□□□□□ -0.63
TUBE1-202ENST00000368662 SIGLEC7Q9Y286 467 aa11.12□□□□□ -0.63
TUBE1-202ENST00000368662 HDGFL3Q9Y3E1 203 aa11.12□□□□□ -0.63
TUBE1-202ENST00000368662 CSAG2Q9Y5P2 127 aa11.12□□□□□ -0.63
TUBE1-202ENST00000368662 GMPPBQ9Y5P6 360 aa11.12□□□□□ -0.63
TUBE1-202ENST00000368662 ZC3H12DA2A288 527 aaKnown RBP11.11□□□□□ -0.63
TUBE1-202ENST00000368662 SHISA8B8ZZ34 492 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 TAF4O00268 1085 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 WISP1O95388 367 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 SOX14O95416 240 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 TP53P04637 393 aaPredicted RBP11.11□□□□□ -0.63
TUBE1-202ENST00000368662 HIST1H2ABP04908 130 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 TFPIP10646 304 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 POU1F1P28069 291 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 POLR2IP36954 125 aaKnown RBP11.11□□□□□ -0.63
TUBE1-202ENST00000368662 PPIAP62937 165 aaKnown RBP11.11□□□□□ -0.63
TUBE1-202ENST00000368662 SMARCD3Q6STE5 483 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 USP51Q70EK9 711 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 HIST3H2AQ7L7L0 130 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 MAMDC2Q7Z304 686 aaPredicted RBP11.11□□□□□ -0.63
TUBE1-202ENST00000368662 SLC46A3Q7Z3Q1 461 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 MEX3DQ86XN8 651 aaKnown RBP11.11□□□□□ -0.63
TUBE1-202ENST00000368662 FAM109AQ8N4B1 249 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 MFSD8Q8NHS3 518 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 HIST1H2ACQ93077 130 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 SFXN2Q96NB2 322 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 PITX2Q99697 317 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 TAPBPLQ9BX59 468 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 PRRG3Q9BZD7 231 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 CORINQ9Y5Q5 1042 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 HSPE1-MOB4S4R3N1 261 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 MGAQ8IWI9 3026 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 CACNA1GO43497 2377 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 ZAR1LA6NP61 321 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 E9PQ18 207 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 H3BML4 177 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 EFNA2O43921 213 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 PTP4A3O75365 173 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 BGLAPP02818 100 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 ASAH2BP0C7U1 165 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 TCEA1P23193 301 aaKnown RBP11.11□□□□□ -0.63
TUBE1-202ENST00000368662 MYF6P23409 242 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 GTF2E2P29084 291 aaKnown RBP11.11□□□□□ -0.63
TUBE1-202ENST00000368662 EPHA2P29317 976 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 IDUAP35475 653 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 SMSP52788 366 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 TPD52P55327 224 aaPredicted RBP11.11□□□□□ -0.63
TUBE1-202ENST00000368662 CDC42P60953 191 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 SLC27A4Q6P1M0 643 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 Q6ZS92 163 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 YRDCQ86U90 279 aaKnown RBP11.11□□□□□ -0.63
TUBE1-202ENST00000368662 KIF18BQ86Y91 864 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 CHERPQ8IWX8 916 aaKnown RBP11.11□□□□□ -0.63
TUBE1-202ENST00000368662 C8orf59Q8N0T1 100 aaPredicted RBP11.11□□□□□ -0.63
TUBE1-202ENST00000368662 MARVELD2Q8N4S9 558 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 TMEM251Q8N6I4 163 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 OR5M1Q8NGP8 315 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 EXTL1Q92935 676 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 ABHD17AQ96GS6 310 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 ZNF570Q96NI8 536 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 PTDSS2Q9BVG9 487 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 OR11A1Q9GZK7 315 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 ADNPQ9H2P0 1102 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 OR52D1Q9H346 318 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 EGLN3Q9H6Z9 239 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 ACKR4Q9NPB9 350 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 TBC1D23Q9NUY8 699 aa11.11□□□□□ -0.63
TUBE1-202ENST00000368662 NDUFB2O95178 105 aa11.1□□□□□ -0.63
TUBE1-202ENST00000368662 PEPDP12955 493 aa11.1□□□□□ -0.63
TUBE1-202ENST00000368662 IL11P20809 199 aa11.1□□□□□ -0.63
TUBE1-202ENST00000368662 GGT2P36268 569 aa11.1□□□□□ -0.63
TUBE1-202ENST00000368662 MAGEA5P43359 124 aa11.1□□□□□ -0.63
TUBE1-202ENST00000368662 GIPRP48546 466 aa11.1□□□□□ -0.63
TUBE1-202ENST00000368662 CD97P48960 835 aa11.1□□□□□ -0.63
TUBE1-202ENST00000368662 B3GALT5-AS1P59052 145 aa11.1□□□□□ -0.63
TUBE1-202ENST00000368662 RPS4XP62701 263 aaKnown RBP11.1□□□□□ -0.63
TUBE1-202ENST00000368662 ZNF691Q5VV52 312 aa11.1□□□□□ -0.63
TUBE1-202ENST00000368662 KRT80Q6KB66 452 aa11.1□□□□□ -0.63
TUBE1-202ENST00000368662 NANOGNBQ7Z5D8 188 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms