RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 PTGER4P35408 488 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 MAP2K6P52564 334 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 UGT2B15P54855 530 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 NUP107P57740 925 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 CSNK2A1P68400 391 aaPredicted RBP12.45□□□□□ -0.42
TPM3-211ENST00000368531 CCNIQ14094 377 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 IQCCQ4KMZ1 466 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 C4orf17Q53FE4 359 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 FGD3Q5JSP0 725 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 SWT1Q5T5J6 900 aaKnown RBP12.45□□□□□ -0.42
TPM3-211ENST00000368531 NSUN5P2Q63ZY6 315 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 LINC00114Q6XXX2 140 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 SEM1Q6ZVN7 128 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 MEX3DQ86XN8 651 aaKnown RBP12.45□□□□□ -0.42
TPM3-211ENST00000368531 MED12LQ86YW9 2145 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 OFCC1Q8IZS5 231 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 MARVELD2Q8N4S9 558 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 TAAR8Q969N4 342 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 MPP4Q96JB8 637 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 UCN2Q96RP3 112 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 VKORC1Q9BQB6 163 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 TTYH2Q9BSA4 534 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 CHID1Q9BWS9 393 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 TAPBPLQ9BX59 468 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 MAN2C1Q9NTJ4 1040 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 CLCF1Q9UBD9 225 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 MCTS1Q9ULC4 181 aaKnown RBP12.45□□□□□ -0.42
TPM3-211ENST00000368531 DOCK7Q96N67 2140 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 TRAV36DV7A0A075B6V5 113 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 CD8B2A6NJW9 211 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 LIPT2A6NK58 231 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 LRRN3E7EW58 273 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 PIP5K1CO60331 668 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 NPIPB7O75200 414 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 AKR7A3O95154 331 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 GADD45GO95257 159 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 PMS2P2O95744 297 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 GPIP06744 558 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 RAP2AP10114 183 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 THRBP10828 461 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 RRM2P31350 389 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 PER3P56645 1201 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 RAC3P60763 192 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 SLC35A1P78382 337 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 KPNB1Q14974 876 aaKnown RBP12.44□□□□□ -0.42
TPM3-211ENST00000368531 TMEM211Q6ICI0 200 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 TBPL2Q6SJ96 375 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 ZNF730Q6ZMV8 503 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 PIWIL3Q7Z3Z3 882 aaKnown RBP12.44□□□□□ -0.42
TPM3-211ENST00000368531 C9orf106Q8NAJ2 232 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 PIK3C3Q8NEB9 887 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 PFN4Q8NHR9 129 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 TMEM239Q8WW34 195 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 CPNE4Q96A23 557 aaPredicted RBP12.44□□□□□ -0.42
TPM3-211ENST00000368531 ZHX1-C8orf76Q96EF9 292 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 DMRTA2Q96SC8 542 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 ZNF347Q96SE7 839 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 EPYCQ99645 322 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 TMEM43Q9BTV4 400 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 PTDSS2Q9BVG9 487 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 CALHM2Q9HA72 323 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 PAQR5Q9NXK6 330 aaPredicted RBP12.44□□□□□ -0.42
TPM3-211ENST00000368531 C6orf203Q9P0P8 240 aaPredicted RBP12.44□□□□□ -0.42
TPM3-211ENST00000368531 CLEC4AQ9UMR7 237 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 TRAPPC4Q9Y296 219 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 MED31Q9Y3C7 131 aa12.44□□□□□ -0.42
TPM3-211ENST00000368531 TOXO94900 526 aa12.43□□□□□ -0.42
TPM3-211ENST00000368531 CH25HO95992 272 aa12.43□□□□□ -0.42
TPM3-211ENST00000368531 IL2RAP01589 272 aa12.43□□□□□ -0.42
TPM3-211ENST00000368531 GTF2E2P29084 291 aaKnown RBP12.43□□□□□ -0.42
TPM3-211ENST00000368531 AGFG1P52594 562 aaKnown RBP12.43□□□□□ -0.42
TPM3-211ENST00000368531 LSM11P83369 360 aaKnown RBP eCLIP12.43□□□□□ -0.42
TPM3-211ENST00000368531 LTBQ06643 244 aa12.43□□□□□ -0.42
TPM3-211ENST00000368531 PPP1R8Q12972 351 aaKnown RBP12.43□□□□□ -0.42
TPM3-211ENST00000368531 ZNF239Q16600 458 aaKnown RBP12.43□□□□□ -0.42
TPM3-211ENST00000368531 PODNL1Q6PEZ8 512 aa12.43□□□□□ -0.42
TPM3-211ENST00000368531 FCRLAQ7L513 359 aa12.43□□□□□ -0.42
TPM3-211ENST00000368531 RRM2BQ7LG56 351 aa12.43□□□□□ -0.42
TPM3-211ENST00000368531 ADGRE4PQ86SQ3 457 aa12.43□□□□□ -0.42
TPM3-211ENST00000368531 CCDC103Q8IW40 242 aa12.43□□□□□ -0.42
TPM3-211ENST00000368531 MCEMP1Q8IX19 187 aa12.43□□□□□ -0.42
TPM3-211ENST00000368531 GCNT2Q8N0V5 402 aa12.43□□□□□ -0.42
TPM3-211ENST00000368531 TMEM99Q8N816 258 aa12.43□□□□□ -0.42
TPM3-211ENST00000368531 MFSD8Q8NHS3 518 aa12.43□□□□□ -0.42
TPM3-211ENST00000368531 RND1Q92730 232 aa12.43□□□□□ -0.42
TPM3-211ENST00000368531 WNT2BQ93097 391 aa12.43□□□□□ -0.42
TPM3-211ENST00000368531 POP5Q969H6 163 aaKnown RBP12.43□□□□□ -0.42
TPM3-211ENST00000368531 SLCO4A1Q96BD0 722 aa12.43□□□□□ -0.42
TPM3-211ENST00000368531 INTS12Q96CB8 462 aaKnown RBP12.43□□□□□ -0.42
TPM3-211ENST00000368531 CCDC120Q96HB5 630 aa12.43□□□□□ -0.42
TPM3-211ENST00000368531 HS6ST2Q96MM7 605 aa12.43□□□□□ -0.42
TPM3-211ENST00000368531 MOGAT1Q96PD6 335 aa12.43□□□□□ -0.42
TPM3-211ENST00000368531 NAA11Q9BSU3 229 aaPredicted RBP12.43□□□□□ -0.42
TPM3-211ENST00000368531 MEPEQ9NQ76 525 aaPredicted RBP12.43□□□□□ -0.42
TPM3-211ENST00000368531 KLHL13Q9P2N7 655 aa12.43□□□□□ -0.42
TPM3-211ENST00000368531 ERRFI1Q9UJM3 462 aaPredicted RBP12.43□□□□□ -0.42
TPM3-211ENST00000368531 SLC5A6Q9Y289 635 aa12.43□□□□□ -0.42
TPM3-211ENST00000368531 ZNF175Q9Y473 711 aa12.43□□□□□ -0.42
TPM3-211ENST00000368531 A0A087WUU8 490 aa12.42□□□□□ -0.42
TPM3-211ENST00000368531 TRBV4-1A0A0J9YWV2 114 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms