RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 VWA5B2Q8N398 1253 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 C4orf32Q8N8J7 132 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 M1APQ8TC57 530 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 ZNF675Q8TD23 568 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 MITD1Q8WV92 249 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 RAB8BQ92930 207 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 ELP4Q96EB1 424 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 TEPSINQ96N21 525 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 SLC6A7Q99884 636 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 EBF4Q9BQW3 602 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 DPH7Q9BTV6 452 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 TXNL4BQ9NX01 149 aaKnown RBP8.07□□□□□ -1.12
SYNE1-206ENST00000367253 TAAR2Q9P1P5 351 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 NLKQ9UBE8 527 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 PCDHGA7Q9Y5G6 932 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 V9GYS6 101 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 LAMB2P55268 1798 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 A0A1B0GV50 99 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 C1orf226A1L170 272 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 E7ESA3 106 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 SOX15O60248 233 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 HSPA7P48741 367 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 CYCSP99999 105 aaKnown RBP8.07□□□□□ -1.12
SYNE1-206ENST00000367253 GRB7Q14451 532 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 B3GNTL1Q67FW5 361 aaPredicted RBP8.07□□□□□ -1.12
SYNE1-206ENST00000367253 GLT8D1Q68CQ7 371 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 FAM109BQ6ICB4 259 aaPredicted RBP8.07□□□□□ -1.12
SYNE1-206ENST00000367253 MAMDC2Q7Z304 686 aaPredicted RBP8.07□□□□□ -1.12
SYNE1-206ENST00000367253 BPIFB2Q8N4F0 458 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 CADM4Q8NFZ8 388 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 FAM110BQ8TC76 370 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 PYCR2Q96C36 320 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 PEX11GQ96HA9 241 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 PLEKHA3Q9HB20 300 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 ZDHHC2Q9UIJ5 367 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 ARPC5O15511 151 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 FMO6PO60774 539 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 HTR1AP08908 422 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 SELEP16581 610 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 MAOAP21397 527 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 GSK3AP49840 483 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 NR0B1P51843 470 aaKnown RBP8.07□□□□□ -1.12
SYNE1-206ENST00000367253 OR2B8PP59922 312 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 CTXN1P60606 82 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 LASP1Q14847 261 aaKnown RBP8.07□□□□□ -1.12
SYNE1-206ENST00000367253 AARDQ4LEZ3 155 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 MEDAGQ5VYS4 303 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 LEMD1Q68G75 181 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 METAP1DQ6UB28 335 aaPredicted RBP8.07□□□□□ -1.12
SYNE1-206ENST00000367253 ERASQ7Z444 233 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 MISPQ8IVT2 679 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 TMEM151AQ8N4L1 468 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 DCBLD1Q8N8Z6 715 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 NMNAT1Q9HAN9 279 aaPredicted RBP8.07□□□□□ -1.12
SYNE1-206ENST00000367253 ZNF586Q9NXT0 402 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 OR6C2Q9NZP2 312 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 RAB22AQ9UL26 194 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 M0R2N6 131 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 TNFRSF10CO14798 259 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 GALR2O43603 387 aaPredicted RBP8.07□□□□□ -1.12
SYNE1-206ENST00000367253 TRAF3IP2O43734 574 aaPredicted RBP8.07□□□□□ -1.12
SYNE1-206ENST00000367253 LRP3O75074 770 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 JUNP05412 331 aaKnown RBP8.07□□□□□ -1.12
SYNE1-206ENST00000367253 FKBP2P26885 142 aaKnown RBP8.07□□□□□ -1.12
SYNE1-206ENST00000367253 CHATP28329 748 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 ARL16Q0P5N6 197 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 UPP1Q16831 310 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 HES3Q5TGS1 186 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 PNCKQ6P2M8 343 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 C19orf48Q6RUI8 117 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 TEX261Q6UWH6 196 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 CLEC20AQ6ZU45 233 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 LURAP1LQ8IV03 231 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 SELENOHQ8IZQ5 122 aaKnown RBP8.07□□□□□ -1.12
SYNE1-206ENST00000367253 PROKR1Q8TCW9 393 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 OR7D2Q96RA2 312 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 ARV1Q9H2C2 271 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 FLRT1Q9NZU1 646 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 B3GAT1Q9P2W7 334 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 NPFFR2Q9Y5X5 522 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 U3KQ87 197 aa8.07□□□□□ -1.12
SYNE1-206ENST00000367253 ANKRD66B4E2M5 251 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 SMIM6P0DI80 62 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 RPA2P15927 270 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 NQO2P16083 231 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 CHRFAM7AQ494W8 412 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 ZNF546Q86UE3 836 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 THOC6Q86W42 341 aaKnown RBP8.06□□□□□ -1.12
SYNE1-206ENST00000367253 NPAS3Q8IXF0 933 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 ZNF418Q8TF45 676 aaPredicted RBP8.06□□□□□ -1.12
SYNE1-206ENST00000367253 DNAJA3Q96EY1 480 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 LCORQ96JN0 433 aaPredicted RBP8.06□□□□□ -1.12
SYNE1-206ENST00000367253 ZNF382Q96SR6 550 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 SEMA6CQ9H3T2 930 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 SMCO4Q9NRQ5 59 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 TCAF1Q9Y4C2 921 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 COL24A1Q17RW2 1714 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 TAF1P21675 1872 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 TRBV23-1A0A0A0MS06 115 aa8.06□□□□□ -1.12
SYNE1-206ENST00000367253 PRRT4C9JH25 899 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms