RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 RBMXL3Q8N7X1 1067 aaKnown RBP10.2□□□□□ -0.78
CLIP1-203ENST00000361654 ARL6Q9H0F7 186 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 P2RY12Q9H244 342 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 NDRG4Q9ULP0 352 aaKnown RBP10.2□□□□□ -0.78
CLIP1-203ENST00000361654 PCDHGA1Q9Y5H4 931 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 TMED7-TICAM2A0A0A6YYA0 188 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 FAM166BA8MTA8 275 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 SERPINA7P05543 415 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 DEFA4P12838 97 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 GM2AP17900 193 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 MAP4K2Q12851 820 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 NPSR1Q6W5P4 371 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 FAM83HQ6ZRV2 1179 aaPredicted RBP10.2□□□□□ -0.78
CLIP1-203ENST00000361654 CLEC14AQ86T13 490 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 ASB16Q96NS5 453 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 OR14A2Q96R54 314 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 OR52D1Q9H346 318 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 GFOD1Q9NXC2 390 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 TMED7Q9Y3B3 224 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 RICTORQ6R327 1708 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 CCDC187A0A096LP49 1063 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 I3L521 148 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 HOXC11O43248 304 aaPredicted RBP10.2□□□□□ -0.78
CLIP1-203ENST00000361654 ADAM23O75077 832 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 CNIH1O95406 144 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 RPL11P62913 178 aaKnown RBP10.2□□□□□ -0.78
CLIP1-203ENST00000361654 MARCH8Q5T0T0 291 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 IQCF1Q8N6M8 205 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 OR6T1Q8NGN1 323 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 STT3BQ8TCJ2 826 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 PLEKHM1Q9Y4G2 1056 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 LOC285095A0A1B0GVY8 99 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 OR6C65A6NJZ3 312 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 FRS3O43559 492 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 UTS2O95399 124 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 CRYAAP02489 173 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 ELK4P28324 431 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 USF2Q15853 346 aaPredicted RBP10.2□□□□□ -0.78
CLIP1-203ENST00000361654 CGB2Q6NT52 195 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 OR4A16Q8NH70 328 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 ADAMTS19Q8TE59 1207 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 ZBED3Q96IU2 234 aaPredicted RBP10.2□□□□□ -0.78
CLIP1-203ENST00000361654 CPPED1Q9BRF8 314 aaPredicted RBP10.2□□□□□ -0.78
CLIP1-203ENST00000361654 C12orf49Q9H741 205 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 FOLH1BQ9HBA9 442 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 MOKQ9UQ07 419 aa10.2□□□□□ -0.78
CLIP1-203ENST00000361654 MAP2K4P45985 399 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 LCN8Q6JVE9 175 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 SERPINA11Q86U17 422 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 PIANPQ8IYJ0 282 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 MFRPQ9BY79 579 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 OLAHQ9NV23 265 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 MYEF2Q9P2K5 600 aaKnown RBP10.19□□□□□ -0.78
CLIP1-203ENST00000361654 CSNK1G3Q9Y6M4 447 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 PEAK1Q9H792 1746 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 ZCWPW2A0A1B0GU75 182 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 CRYM-AS1A6NIL9 109 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 FZD7O75084 574 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 BMP1P13497 986 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 ADRA1AP35348 466 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 ETV6P41212 452 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 HOXA1P49639 335 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-203ENST00000361654 TAS2R46P59540 309 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 RPS18P62269 152 aaKnown RBP10.19□□□□□ -0.78
CLIP1-203ENST00000361654 SMAD2Q15796 467 aaKnown RBP10.19□□□□□ -0.78
CLIP1-203ENST00000361654 DUSP7Q16829 419 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 METTL4Q8N3J2 472 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 INPP5KQ9BT40 448 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 BARHL1Q9BZE3 327 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 RPS17P08708 135 aaKnown RBP10.19□□□□□ -0.78
CLIP1-203ENST00000361654 PRPH2P23942 346 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 ITGB8P26012 769 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 ZXDBP98169 803 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 TEKQ02763 1124 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 CEACAM7Q14002 265 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 ENTPD8Q5MY95 495 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 AADACL3Q5VUY0 350 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 BRICD5Q6PL45 260 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 PDLIM5Q96HC4 596 aaKnown RBP10.19□□□□□ -0.78
CLIP1-203ENST00000361654 TMEM59Q9BXS4 323 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 SHARPINQ9H0F6 387 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 TP63Q9H3D4 680 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-203ENST00000361654 SSUH2Q9Y2M2 353 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 SPEF2Q9C093 1822 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 TSPAN15O95858 294 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 APOA2P02652 100 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 AKAIN1P0CW23 69 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 GNB3P16520 340 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 MPPED2Q15777 294 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 OR52W1Q6IF63 320 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 NLRC3Q7RTR2 1065 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 GPR155Q7Z3F1 870 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 TP53INP2Q8IXH6 220 aa10.19□□□□□ -0.78
CLIP1-203ENST00000361654 TMEM221A6NGB7 291 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 NOTOA8MTQ0 251 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 TGM6O95932 706 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 NDUFB7P17568 137 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 RAC1P63000 192 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 SQSTM1Q13501 440 aa10.18□□□□□ -0.78
CLIP1-203ENST00000361654 ZNF181Q2M3W8 571 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms