RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 ABHD11Q8NFV4 315 aa12.49□□□□□ -0.41
LDB3-202ENST00000361373 CADM4Q8NFZ8 388 aa12.49□□□□□ -0.41
LDB3-202ENST00000361373 TBC1D15Q8TC07 691 aa12.49□□□□□ -0.41
LDB3-202ENST00000361373 KCTD12Q96CX2 325 aaKnown RBP12.49□□□□□ -0.41
LDB3-202ENST00000361373 FOXQ1Q9C009 403 aa12.49□□□□□ -0.41
LDB3-202ENST00000361373 LHX6Q9UPM6 363 aa12.49□□□□□ -0.41
LDB3-202ENST00000361373 SLC17A4Q9Y2C5 497 aa12.49□□□□□ -0.41
LDB3-202ENST00000361373 NOSIPQ9Y314 301 aaKnown RBP12.49□□□□□ -0.41
LDB3-202ENST00000361373 DOCK1Q14185 1865 aa12.49□□□□□ -0.41
LDB3-202ENST00000361373 LMO7DNF2Z398 122 aa12.49□□□□□ -0.41
LDB3-202ENST00000361373 PRAF2O60831 178 aa12.49□□□□□ -0.41
LDB3-202ENST00000361373 RAB40ALP0C0E4 278 aa12.49□□□□□ -0.41
LDB3-202ENST00000361373 DNASE1P24855 282 aa12.49□□□□□ -0.41
LDB3-202ENST00000361373 SNU13P55769 128 aaKnown RBP12.49□□□□□ -0.41
LDB3-202ENST00000361373 VASH1Q7L8A9 365 aaPredicted RBP12.49□□□□□ -0.41
LDB3-202ENST00000361373 ABHD5Q8WTS1 349 aa12.49□□□□□ -0.41
LDB3-202ENST00000361373 RAB40AQ8WXH6 277 aa12.49□□□□□ -0.41
LDB3-202ENST00000361373 APMAPQ9HDC9 416 aa12.49□□□□□ -0.41
LDB3-202ENST00000361373 MGAT4CQ9UBM8 478 aa12.49□□□□□ -0.41
LDB3-202ENST00000361373 FBXL3Q9UKT7 428 aa12.49□□□□□ -0.41
LDB3-202ENST00000361373 AK6Q9Y3D8 172 aaKnown RBP12.49□□□□□ -0.41
LDB3-202ENST00000361373 ANKRD12Q6UB98 2062 aa12.49□□□□□ -0.41
LDB3-202ENST00000361373 TMEM212A6NML5 194 aa12.49□□□□□ -0.41
LDB3-202ENST00000361373 F13BP05160 661 aa12.49□□□□□ -0.41
LDB3-202ENST00000361373 CD22P20273 847 aa12.49□□□□□ -0.41
LDB3-202ENST00000361373 SSTR4P31391 388 aa12.49□□□□□ -0.41
LDB3-202ENST00000361373 LSAMPQ13449 338 aa12.49□□□□□ -0.41
LDB3-202ENST00000361373 FAM69AQ5T7M9 428 aa12.49□□□□□ -0.41
LDB3-202ENST00000361373 FUNDC1Q8IVP5 155 aa12.49□□□□□ -0.41
LDB3-202ENST00000361373 MORN4Q8NDC4 146 aa12.49□□□□□ -0.41
LDB3-202ENST00000361373 VAMP5O95183 116 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 CEACAM5P06731 702 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 MPEG1Q2M385 716 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 DHRS4L2Q6PKH6 230 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 ELMOD2Q8IZ81 293 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 SLC16A11Q8NCK7 471 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 LRRC20Q8TCA0 184 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 TUBB1Q9H4B7 451 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 CPNE5Q9HCH3 593 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 STRCP1A6NGW2 1772 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 GASTP01350 101 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 CTGFP29279 349 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 APOBEC1P41238 236 aaKnown RBP12.48□□□□□ -0.41
LDB3-202ENST00000361373 CLDN17P56750 224 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 PPP2CBP62714 309 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 PPP2CAP67775 309 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 PPA1Q15181 289 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 ANKRD13BQ86YJ7 626 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 OR5J2Q8NH18 312 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 STOML3Q8TAV4 291 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 PHYHIPQ92561 330 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 UTP4Q969X6 686 aaKnown RBP12.48□□□□□ -0.41
LDB3-202ENST00000361373 GIMAP5Q96F15 307 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 HRASLS5Q96KN8 279 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 ALG12Q9BV10 488 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 TREM1Q9NP99 234 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 NUMA1Q14980 2115 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 KDM4EB2RXH2 506 aaPredicted RBP12.48□□□□□ -0.41
LDB3-202ENST00000361373 F5H0A9 414 aaPredicted RBP12.48□□□□□ -0.41
LDB3-202ENST00000361373 RAB3DO95716 219 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 MAOAP21397 527 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 GALNT11Q8NCW6 608 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 GGHQ92820 318 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 SORCS2Q96PQ0 1159 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 TP63Q9H3D4 680 aaPredicted RBP12.48□□□□□ -0.41
LDB3-202ENST00000361373 TMA7Q9Y2S6 64 aaKnown RBP12.48□□□□□ -0.41
LDB3-202ENST00000361373 FAM183AA6NL82 134 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 CLDN24A6NM45 220 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 B4DXG7 233 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 J3KTA2 159 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 DSCR3O14972 297 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 ADH6P28332 368 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 ZNF81P51508 661 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 EFNA3P52797 238 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 KIAA1211LQ6NV74 962 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 B3GNT8Q7Z7M8 397 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 TNFRSF13CQ96RJ3 184 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 ERVK13-1Q9NX77 482 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 BCORQ6W2J9 1755 aa12.48□□□□□ -0.41
LDB3-202ENST00000361373 SPTY2D1-AS1A0A0U1RR47 76 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 LINC01565O15544 149 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 B4GALT3O60512 393 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 GLSO94925 669 aaPredicted RBP12.47□□□□□ -0.41
LDB3-202ENST00000361373 GYPBP06028 91 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 NID1P14543 1247 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 ATXN7L3Q14CW9 347 aaPredicted RBP12.47□□□□□ -0.41
LDB3-202ENST00000361373 SLC35D3Q5M8T2 416 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 MAVSQ7Z434 540 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 GATA6Q92908 595 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 CTRCQ99895 268 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 PRRT1Q99946 306 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 DYNLRB1Q9NP97 96 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 TMEM9BQ9NQ34 198 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 NPFFR2Q9Y5X5 522 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 KIAA1551Q9HCM1 1747 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 ZNF736B4DX44 427 aaPredicted RBP12.47□□□□□ -0.41
LDB3-202ENST00000361373 ADAM23O75077 832 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 CD34P28906 385 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 AQP2P41181 271 aa12.47□□□□□ -0.41
LDB3-202ENST00000361373 ETV6P41212 452 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms