RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 ANKK1Q8NFD2 765 aa12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 NXF5Q9H1B4 397 aaKnown RBP12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 EVA1AQ9H8M9 152 aa12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 FOXJ2Q9P0K8 574 aa12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 PTRH2Q9Y3E5 179 aaKnown RBP12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 CELSR3Q9NYQ7 3312 aa12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 PTPRZ1P23471 2315 aaPredicted RBP12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 A0A087WUU8 490 aa12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 PEX12O00623 359 aa12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 KLF7O75840 302 aaPredicted RBP12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 FTH1P19P0C7X4 201 aa12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 RNF144AP50876 292 aaPredicted RBP12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 GPR143P51810 404 aa12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 EEF1A1P68104 462 aaKnown RBP12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 EBPQ15125 230 aaKnown RBP12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 MAPK14Q16539 360 aa12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 PYDC2Q56P42 97 aa12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 NXNL2Q5VZ03 156 aa12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 TMEM205Q6UW68 189 aa12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 C6orf15Q6UXA7 325 aaPredicted RBP12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 ZNF730Q6ZMV8 503 aa12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 LSRQ86X29 649 aaPredicted RBP12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 PIGXQ8TBF5 258 aa12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 GATAD2BQ8WXI9 593 aa12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 ADIPOR1Q96A54 375 aa12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 C8orf44Q96CB5 159 aa12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 GPA33Q99795 319 aa12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 WDR77Q9BQA1 342 aaPredicted RBP12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 SPRY4Q9C004 299 aa12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 WWTR1Q9GZV5 400 aa12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 MIXL1Q9H2W2 232 aa12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.06□□□□□ -0.48
SQSTM1-201ENST00000360718 KDM4EB2RXH2 506 aaPredicted RBP12.05□□□□□ -0.48
SQSTM1-201ENST00000360718 PROB1E7EW31 1015 aa12.05□□□□□ -0.48
SQSTM1-201ENST00000360718 ATP12AP54707 1039 aa12.05□□□□□ -0.48
SQSTM1-201ENST00000360718 GAS1P54826 345 aa12.05□□□□□ -0.48
SQSTM1-201ENST00000360718 TAB1Q15750 504 aa12.05□□□□□ -0.48
SQSTM1-201ENST00000360718 SLC35F1Q5T1Q4 408 aa12.05□□□□□ -0.48
SQSTM1-201ENST00000360718 MRPL2Q5T653 305 aaKnown RBP12.05□□□□□ -0.48
SQSTM1-201ENST00000360718 METAP1DQ6UB28 335 aaPredicted RBP12.05□□□□□ -0.48
SQSTM1-201ENST00000360718 RANBP3LQ86VV4 465 aaPredicted RBP12.05□□□□□ -0.48
SQSTM1-201ENST00000360718 C9orf40Q8IXQ3 194 aa12.05□□□□□ -0.48
SQSTM1-201ENST00000360718 ZNF527Q8NB42 609 aa12.05□□□□□ -0.48
SQSTM1-201ENST00000360718 OSTF1Q92882 214 aa12.05□□□□□ -0.48
SQSTM1-201ENST00000360718 ARHGAP9Q9BRR9 750 aa12.05□□□□□ -0.48
SQSTM1-201ENST00000360718 NRSN2Q9GZP1 204 aa12.05□□□□□ -0.48
SQSTM1-201ENST00000360718 EGLN3Q9H6Z9 239 aa12.05□□□□□ -0.48
SQSTM1-201ENST00000360718 ZNF223Q9UK11 482 aaPredicted RBP12.05□□□□□ -0.48
SQSTM1-201ENST00000360718 CARD8Q9Y2G2 431 aa12.05□□□□□ -0.48
SQSTM1-201ENST00000360718 SF3B6Q9Y3B4 125 aaKnown RBP12.05□□□□□ -0.48
SQSTM1-201ENST00000360718 HEATR5AQ86XA9 2040 aa12.05□□□□□ -0.48
SQSTM1-201ENST00000360718 LINC00854A0A1B0GVQ3 168 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 TRDV1A0A1B0GX56 115 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 CDHR4A6H8M9 788 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 IL33O95760 270 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 UMODP07911 640 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 CLEC2LP0C7M8 214 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 HPGDP15428 266 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 PTBP1P26599 531 aaKnown RBP eCLIP12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 RCVRNP35243 200 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 FOLR3P41439 243 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 STAT5AP42229 794 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 NR0B1P51843 470 aaKnown RBP12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 RPS25P62851 125 aaKnown RBP12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 OR2G6Q5TZ20 316 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 LCN1P1Q5VSP4 162 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 PRICKLE2Q7Z3G6 844 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 KIF18BQ86Y91 864 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 RDH10Q8IZV5 341 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 C17orf47Q8NEP4 570 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 SEMA4CQ9C0C4 833 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 RERGLQ9H628 205 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 CTPS2Q9NRF8 586 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 MED17Q9NVC6 651 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 CENPBD1B2RD01 187 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 TM4SF5O14894 197 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 CASKO14936 926 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 FRS3O43559 492 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 HCN1O60741 890 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 IGHEP01854 428 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 CSF3P09919 207 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 GAAP10253 952 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 TCEA1P23193 301 aaKnown RBP12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 IL12BP29460 328 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 ZNF141Q15928 474 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 TBRG1Q3YBR2 411 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 MZT2AQ6P582 158 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 CD200R1LQ6Q8B3 271 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 C19orf18Q8NEA5 215 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 NFAM1Q8NET5 270 aaPredicted RBP12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 OR2Y1Q8NGV0 311 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 OIT3Q8WWZ8 545 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 ST6GAL2Q96JF0 529 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 FRMD6Q96NE9 622 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 MCHR1Q99705 422 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 KATNB1Q9BVA0 655 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 PLA2G12AQ9BZM1 189 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 UBQLN4Q9NRR5 601 aa12.04□□□□□ -0.48
SQSTM1-201ENST00000360718 PPIEQ9UNP9 301 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms