RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 BBS4Q96RK4 519 aa5.08□□□□□ -1.6
CDC42SE2-201ENST00000360515 C1orf198Q9H425 327 aa5.08□□□□□ -1.6
CDC42SE2-201ENST00000360515 ETAA1Q9NY74 926 aa5.08□□□□□ -1.6
CDC42SE2-201ENST00000360515 TET2Q6N021 2002 aaPredicted RBP5.08□□□□□ -1.6
CDC42SE2-201ENST00000360515 PLXNB1O43157 2135 aa5.08□□□□□ -1.6
CDC42SE2-201ENST00000360515 A0A096LPI6 279 aa5.08□□□□□ -1.6
CDC42SE2-201ENST00000360515 LOC100653049A0A140TA62 436 aa5.08□□□□□ -1.6
CDC42SE2-201ENST00000360515 PIP5K1BO14986 540 aa5.08□□□□□ -1.6
CDC42SE2-201ENST00000360515 KRT34O76011 436 aa5.08□□□□□ -1.6
CDC42SE2-201ENST00000360515 LY6HO94772 140 aa5.08□□□□□ -1.6
CDC42SE2-201ENST00000360515 IFNGR1P15260 489 aa5.08□□□□□ -1.6
CDC42SE2-201ENST00000360515 ARL4CP56559 192 aa5.08□□□□□ -1.6
CDC42SE2-201ENST00000360515 ZNF181Q2M3W8 571 aa5.08□□□□□ -1.6
CDC42SE2-201ENST00000360515 GRINAQ7Z429 371 aa5.08□□□□□ -1.6
CDC42SE2-201ENST00000360515 DYRK2Q92630 601 aa5.08□□□□□ -1.6
CDC42SE2-201ENST00000360515 SEPHS2Q99611 448 aa5.08□□□□□ -1.6
CDC42SE2-201ENST00000360515 NAA11Q9BSU3 229 aaPredicted RBP5.08□□□□□ -1.6
CDC42SE2-201ENST00000360515 MRPL1Q9BYD6 325 aaKnown RBP5.08□□□□□ -1.6
CDC42SE2-201ENST00000360515 TMEM45AQ9NWC5 275 aa5.08□□□□□ -1.6
CDC42SE2-201ENST00000360515 SLC7A8Q9UHI5 535 aa5.08□□□□□ -1.6
CDC42SE2-201ENST00000360515 MOKQ9UQ07 419 aa5.08□□□□□ -1.6
CDC42SE2-201ENST00000360515 SLC35A3Q9Y2D2 325 aa5.08□□□□□ -1.6
CDC42SE2-201ENST00000360515 LRCH1Q9Y2L9 728 aa5.08□□□□□ -1.6
CDC42SE2-201ENST00000360515 CMAHPQ9Y471 501 aa5.08□□□□□ -1.6
CDC42SE2-201ENST00000360515 SHISA8B8ZZ34 492 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 SCDO00767 359 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 SEC31AO94979 1220 aaKnown RBP5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 SBK3P0C264 359 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 H2AFXP16104 143 aaPredicted RBP5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 PLAURQ03405 335 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 ZP4Q12836 540 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 ZNF154Q13106 437 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 PAPD5Q8NDF8 572 aaKnown RBP5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 ARL5BQ96KC2 179 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 ACPTQ9BZG2 426 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 ZNF350Q9GZX5 532 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 SERINC1Q9NRX5 453 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 GPATCH2Q9NW75 528 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 FBLN5Q9UBX5 448 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 REV1Q9UBZ9 1251 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 RASD1Q9Y272 281 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 OR10H1Q9Y4A9 318 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 COL7A1Q02388 2944 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 ZNF264O43296 627 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 OIP5O43482 229 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 RAD51DO75771 328 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 RBP1P09455 135 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 MDKP21741 143 aaPredicted RBP5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 COL8A2P25067 703 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 MNAT1P51948 309 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 RAG2P55895 527 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 SLC3A1Q07837 685 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 RASA2Q15283 850 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 NNATQ16517 81 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 ARHGAP11BQ3KRB8 267 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 TMEM176BQ3YBM2 270 aaPredicted RBP5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 LRRN1Q6UXK5 716 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 LINGO2Q7L985 606 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 ANKS4BQ8N8V4 417 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 OR4F6Q8NGB9 312 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 ZIM3Q96PE6 472 aa5.07□□□□□ -1.6
CDC42SE2-201ENST00000360515 CENPBD1B2RD01 187 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 WNT9BO14905 357 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 PCDH7O60245 1069 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 MRPL33O75394 65 aaKnown RBP5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 NCR1O76036 304 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 PPP1R3DO95685 299 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 IGHV3-13P01766 116 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 LIPAP38571 399 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 FOXG1P55316 489 aaPredicted RBP5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 RELBQ01201 579 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 BAMBIQ13145 260 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 DCTN2Q13561 401 aaKnown RBP5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 QPRTQ15274 297 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 MOGQ16653 247 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 FAM83EQ2M2I3 478 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 TSPO2Q5TGU0 170 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 ZNF774Q6NX45 483 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 LETMD1Q6P1Q0 360 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 EMBQ6PCB8 327 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 RINLQ6ZS11 566 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 ZAR1Q86SH2 424 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 Q8N2B8 174 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 C1orf52Q8N6N3 182 aaKnown RBP5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 BHLHE22Q8NFJ8 381 aaPredicted RBP5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 ZFP28Q8NHY6 868 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 CCT7Q99832 543 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 BAG1Q99933 345 aaPredicted RBP5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 IQCGQ9H095 443 aaKnown RBP5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 OCEL1Q9H607 264 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 RANBP3Q9H6Z4 567 aaPredicted RBP5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 NPIPA5A0A0B4J1W7 369 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 NPIPA7E9PJI5 369 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 NUDT17P0C025 328 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 NHLRC4P0CG21 123 aaPredicted RBP5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 NPIPA8P0DM63 369 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 IMPDH2P12268 514 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 PGGT1BP53609 377 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 DUSP5Q16690 384 aa5.06□□□□□ -1.6
CDC42SE2-201ENST00000360515 SMU1Q2TAY7 513 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms