RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 ZNF75AQ96N20 296 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 V9GY05 133 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 CLIC3O95833 236 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 UHRF1Q96T88 793 aaPredicted RBP9.05□□□□□ -0.96
CUX1-203ENST00000360264 OR14J1Q9UGF5 321 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 COMMD7Q86VX2 200 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 OR2T27Q8NH04 317 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 NETO1Q8TDF5 533 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 INTS12Q96CB8 462 aaKnown RBP9.05□□□□□ -0.96
CUX1-203ENST00000360264 ULBP2Q9BZM5 246 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 COL2A1P02458 1487 aaPredicted RBP9.05□□□□□ -0.96
CUX1-203ENST00000360264 NPIPB15A6NHN6 443 aaPredicted RBP9.05□□□□□ -0.96
CUX1-203ENST00000360264 GPR18Q14330 331 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 TMEM176BQ3YBM2 270 aaPredicted RBP9.05□□□□□ -0.96
CUX1-203ENST00000360264 C19orf47Q8N9M1 422 aaKnown RBP9.05□□□□□ -0.96
CUX1-203ENST00000360264 OR7G1Q8NGA0 311 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 ZBTB8AQ96BR9 441 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 SLC6A18Q96N87 628 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 PCYT2Q99447 389 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 GINS3Q9BRX5 216 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 SMOXQ9NWM0 555 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 GFOD1Q9NXC2 390 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 CD38P28907 300 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 MTCP1P56278 107 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 TNK1Q13470 666 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 EXT1Q16394 746 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 B3GLCTQ6Y288 498 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 SLC39A11Q8N1S5 342 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 MITD1Q8WV92 249 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 THAP7Q9BT49 309 aaPredicted RBP9.05□□□□□ -0.96
CUX1-203ENST00000360264 SLCO5A1Q9H2Y9 848 aa9.05□□□□□ -0.96
CUX1-203ENST00000360264 NMNAT1Q9HAN9 279 aaPredicted RBP9.05□□□□□ -0.96
CUX1-203ENST00000360264 TDRD15B5MCY1 1934 aaKnown RBP9.05□□□□□ -0.96
CUX1-203ENST00000360264 GABRR3A8MPY1 467 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 DTYMKP23919 212 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 DLX5P56178 289 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 CLDN6P56747 220 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 SLC35G1Q2M3R5 365 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 VASNQ6EMK4 673 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 RPS27LQ71UM5 84 aaKnown RBP9.04□□□□□ -0.96
CUX1-203ENST00000360264 DEDD2Q8WXF8 326 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 IL26Q9NPH9 171 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 TAAR2Q9P1P5 351 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 PLEKHM1Q9Y4G2 1056 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 CACNA1AO00555 2505 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 METTL15A6NJ78 407 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 OR6C65A6NJZ3 312 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 MBTPS1Q14703 1052 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 C1orf198Q9H425 327 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 MRPL15Q9P015 296 aaKnown RBP9.04□□□□□ -0.96
CUX1-203ENST00000360264 DPP4P27487 766 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 GMPRP36959 345 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 SUB1P53999 127 aaKnown RBP eCLIP9.04□□□□□ -0.96
CUX1-203ENST00000360264 MLLT11Q13015 90 aaPredicted RBP9.04□□□□□ -0.96
CUX1-203ENST00000360264 HEPHL1Q6MZM0 1159 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 OR52B6Q8NGF0 335 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 SLCO3A1Q9UIG8 710 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 CHRM4P08173 479 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 IDO2Q6ZQW0 420 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 TMEM25Q86YD3 366 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 NPWQ8N729 165 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 TMEM163Q8TC26 289 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 ZMYND19Q96E35 227 aaPredicted RBP9.04□□□□□ -0.96
CUX1-203ENST00000360264 DPCDQ9BVM2 203 aaPredicted RBP9.04□□□□□ -0.96
CUX1-203ENST00000360264 ETV7Q9Y603 341 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 AGAP14A8MT82 685 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 TIMM8AO60220 97 aaPredicted RBP9.04□□□□□ -0.96
CUX1-203ENST00000360264 F3P13726 295 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 ARSDP51689 593 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 YPEL5P62699 121 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 GRB2P62993 217 aaKnown RBP9.04□□□□□ -0.96
CUX1-203ENST00000360264 RANBP10Q6VN20 620 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 MOB3CQ70IA8 216 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 GAREM2Q75VX8 874 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 OR52E1Q8NGJ3 308 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 OR5AR1Q8NGP9 310 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 HDAC8Q9BY41 377 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 IGSF5Q9NSI5 407 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 HIDE1A8MVS5 230 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 LYRM1O43325 122 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 TLE4Q04727 773 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 CTSL3PQ5NE16 218 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 PRICKLE2Q7Z3G6 844 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 ABHD11Q8NFV4 315 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 CEBPBP17676 345 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 KCTD11Q693B1 232 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 ELP2Q6IA86 826 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 TMEM221A6NGB7 291 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 SUSD5O60279 629 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 RPS26P11Q5JNZ5 115 aaPredicted RBP9.04□□□□□ -0.96
CUX1-203ENST00000360264 GAB3Q8WWW8 586 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 PIGCQ92535 297 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 ANKRD60Q9BZ19 345 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 KCNJ10P78508 379 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 OR8B8Q15620 311 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 HTR3DQ70Z44 454 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 ZFP41Q8N8Y5 198 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 C3orf49Q96BT1 292 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 DNAJC15Q9Y5T4 150 aa9.04□□□□□ -0.96
CUX1-203ENST00000360264 A0A1B0GV50 99 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms