RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 GNB5O14775 395 aa13.76□□□□□ -0.21
UBAP1-202ENST00000359544 FRS3O43559 492 aa13.76□□□□□ -0.21
UBAP1-202ENST00000359544 PIP5K1CO60331 668 aa13.76□□□□□ -0.21
UBAP1-202ENST00000359544 CEBPBP17676 345 aa13.76□□□□□ -0.21
UBAP1-202ENST00000359544 AGTR1P30556 359 aa13.76□□□□□ -0.21
UBAP1-202ENST00000359544 ARHGDIBP52566 201 aa13.76□□□□□ -0.21
UBAP1-202ENST00000359544 SLC16A1P53985 500 aa13.76□□□□□ -0.21
UBAP1-202ENST00000359544 STXBP1P61764 594 aaKnown RBP13.76□□□□□ -0.21
UBAP1-202ENST00000359544 TMEM64Q6YI46 380 aa13.76□□□□□ -0.21
UBAP1-202ENST00000359544 SLC36A1Q7Z2H8 476 aa13.76□□□□□ -0.21
UBAP1-202ENST00000359544 NUDT13Q86X67 352 aa13.76□□□□□ -0.21
UBAP1-202ENST00000359544 OR5J2Q8NH18 312 aa13.76□□□□□ -0.21
UBAP1-202ENST00000359544 SFXN5Q8TD22 340 aa13.76□□□□□ -0.21
UBAP1-202ENST00000359544 SLC41A3Q96GZ6 507 aa13.76□□□□□ -0.21
UBAP1-202ENST00000359544 TEAD3Q99594 435 aa13.76□□□□□ -0.21
UBAP1-202ENST00000359544 SMAD5Q99717 465 aaKnown RBP13.76□□□□□ -0.21
UBAP1-202ENST00000359544 RPP25Q9BUL9 199 aaKnown RBP13.76□□□□□ -0.21
UBAP1-202ENST00000359544 MRI1Q9BV20 369 aa13.76□□□□□ -0.21
UBAP1-202ENST00000359544 OR52D1Q9H346 318 aa13.76□□□□□ -0.21
UBAP1-202ENST00000359544 GLIPR2Q9H4G4 154 aa13.76□□□□□ -0.21
UBAP1-202ENST00000359544 EDARQ9UNE0 448 aa13.76□□□□□ -0.21
UBAP1-202ENST00000359544 PLXND1Q9Y4D7 1925 aa13.76□□□□□ -0.21
UBAP1-202ENST00000359544 A0A1W2PRU2 124 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 RAB19A4D1S5 217 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 TRAPPC13A5PLN9 417 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 UNC119BA6NIH7 251 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 RFPL4AA6NLU0 287 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 RFPL4AL1F8VTS6 287 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 PYCARD-AS1I3L0S3 204 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 MRPL3P09001 348 aaKnown RBP13.75□□□□□ -0.21
UBAP1-202ENST00000359544 HNRNPA1P09651 372 aaKnown RBP eCLIP13.75□□□□□ -0.21
UBAP1-202ENST00000359544 RAB40ALP0C0E4 278 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 VSIG10L2P0DP72 767 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 FOSL1P15407 271 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 HMGA1P17096 107 aaKnown RBP13.75□□□□□ -0.21
UBAP1-202ENST00000359544 GDI2P50395 445 aaKnown RBP13.75□□□□□ -0.21
UBAP1-202ENST00000359544 PRKAG1P54619 331 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 RGS8P57771 180 aaPredicted RBP13.75□□□□□ -0.21
UBAP1-202ENST00000359544 LMAN2Q12907 356 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 ARSIQ5FYB1 569 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 TMEM69Q5SWH9 247 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 PRAMEF14Q5SWL7 426 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 C18orf63Q68DL7 685 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 C22orf39Q6P5X5 142 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 GDF7Q7Z4P5 450 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 TMEM185AQ8NFB2 350 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 RAB40AQ8WXH6 277 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 PHYHIPQ92561 330 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 KLK6Q92876 244 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 SMIM19Q96E16 107 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 AMDHD1Q96NU7 426 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 MS4A8Q9BY19 250 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 QRSL1Q9H0R6 528 aaKnown RBP13.75□□□□□ -0.21
UBAP1-202ENST00000359544 CALML5Q9NZT1 146 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 DENND4AQ7Z401 1863 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 ANTXRLA6NF34 631 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 OGG1O15527 345 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 PCDH8O95206 1070 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 SNAPINO95295 136 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 GP1BAP07359 652 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 BMP7P18075 431 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 NTSP30990 170 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 PTH2RP49190 550 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 P2RX1P51575 399 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 ARFIP1P53367 373 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 OC90Q02509 493 aaPredicted RBP13.75□□□□□ -0.21
UBAP1-202ENST00000359544 ZNF805Q5CZA5 627 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 FAAP20Q6NZ36 180 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 C11orf88Q6PI97 169 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 HSD11B1LQ7Z5J1 315 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 LDLRAD3Q86YD5 345 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 C1orf216Q8TAB5 229 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 SLC2A12Q8TD20 617 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 TMEM255BQ8WV15 326 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 SFT2D1Q8WV19 159 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 SMPDL3BQ92485 455 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 FGF13Q92913 245 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 SLC25A38Q96DW6 304 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 DERL3Q96Q80 235 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 F2RL3Q96RI0 385 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 MCHR1Q99705 422 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 RHBGQ9H310 441 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 ADGRL4Q9HBW9 690 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 GPR55Q9Y2T6 319 aaPredicted RBP13.75□□□□□ -0.21
UBAP1-202ENST00000359544 MRPS23Q9Y3D9 190 aaKnown RBP13.75□□□□□ -0.21
UBAP1-202ENST00000359544 NOTCH4Q99466 2003 aa13.75□□□□□ -0.21
UBAP1-202ENST00000359544 CDC42EP2O14613 210 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 EIF4E2O60573 245 aaKnown RBP13.74□□□□□ -0.21
UBAP1-202ENST00000359544 FMO6PO60774 539 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 POP4O95707 220 aaKnown RBP13.74□□□□□ -0.21
UBAP1-202ENST00000359544 ZGLP1P0C6A0 271 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 DCTDP32321 178 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 MNDAP41218 407 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 POU4F2Q12837 409 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 LASP1Q14847 261 aaKnown RBP13.74□□□□□ -0.21
UBAP1-202ENST00000359544 NDUFAF6Q330K2 333 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 DHRS7BQ6IAN0 325 aaPredicted RBP13.74□□□□□ -0.21
UBAP1-202ENST00000359544 TMEM220Q6QAJ8 160 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 LCTLQ6UWM7 567 aa13.74□□□□□ -0.21
UBAP1-202ENST00000359544 FAM129CQ86XR2 697 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms