RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 ABHD13Q7L211 337 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 KCNRGQ8N5I3 272 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 CA5BP1Q8WTZ4 195 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 ARHGAP21Q5T5U3 1957 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 PCCBP05166 539 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 C1GALT1C1LP0DN25 315 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 OR2G2Q8NGZ5 317 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 OR52I2Q8NH67 350 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 NPRL2Q8WTW4 380 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 DVL3Q92997 716 aaPredicted RBP5.68□□□□□ -1.5
VPS13B-203ENST00000358544 SCMH1Q96GD3 660 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 GDF2Q9UK05 429 aaPredicted RBP5.68□□□□□ -1.5
VPS13B-203ENST00000358544 NAV1Q8NEY1 1877 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 ATAD5Q96QE3 1844 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 GFRA2O00451 464 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 KDELR3O43731 214 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 OPRD1P41143 372 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 DSC1Q08554 894 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 HYAL2Q12891 473 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 FCRLBQ6BAA4 426 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 HORMAD2Q8N7B1 307 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 NANOGP1Q8N7R0 232 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 SMIM4Q8WVI0 70 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 UBXN10Q96LJ8 280 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 CHRDQ9H2X0 955 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 SUV39H2Q9H5I1 410 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 ENY2Q9NPA8 101 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 ASIC5Q9NY37 505 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 PLAGL1Q9UM63 463 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 BACE2Q9Y5Z0 518 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 A0A0B4J203 849 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 J3QR89 54 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 CYB5BO43169 146 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 AHRP35869 848 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 TBPL1P62380 186 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 DUSP28Q4G0W2 176 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 TMEM35AQ53FP2 167 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 MANEALQ5VSG8 457 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 CD300LGQ6UXG3 332 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 TRAPPC6BQ86SZ2 158 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 BAGE3Q86Y29 109 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 BAGE2Q86Y30 109 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 OR51S1Q8NGJ8 323 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 SCLYQ96I15 445 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 PCYT2Q99447 389 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 SLC25A31Q9H0C2 315 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 DPP7Q9UHL4 492 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 TSPAN12O95859 305 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 TBX18O95935 607 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 ELAVL4P26378 380 aaKnown RBP5.68□□□□□ -1.5
VPS13B-203ENST00000358544 VAMP3Q15836 100 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 FAM74A1Q5RGS3 127 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 OR5M10Q6IEU7 315 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 NIPAL3Q6P499 406 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 PRAP1Q96NZ9 151 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 ZNF385DQ9H6B1 395 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 GPR31O00270 319 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 LDB2O43679 373 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 ZNF84P51523 738 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 RIDAP52758 137 aaKnown RBP5.68□□□□□ -1.5
VPS13B-203ENST00000358544 HLXQ14774 488 aaPredicted RBP5.68□□□□□ -1.5
VPS13B-203ENST00000358544 LEXMQ3ZCV2 418 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 HIST1H2AAQ96QV6 131 aa5.68□□□□□ -1.5
VPS13B-203ENST00000358544 DOCK4Q8N1I0 1966 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 PRSS56P0CW18 603 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 EVX1P49640 407 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 CLDN12P56749 244 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 TOMM20LQ6UXN7 152 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 UNC5DQ6UXZ4 953 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 RHOUQ7L0Q8 258 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 TP53I13Q8NBR0 393 aaPredicted RBP5.67□□□□□ -1.5
VPS13B-203ENST00000358544 GAS2L1Q99501 681 aaPredicted RBP5.67□□□□□ -1.5
VPS13B-203ENST00000358544 NIPSNAP3BQ9BS92 247 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 LMAN1LQ9HAT1 526 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 EXO1Q9UQ84 846 aaKnown RBP5.67□□□□□ -1.5
VPS13B-203ENST00000358544 PIEZO2Q9H5I5 2752 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 LOC100289279A0A1B0GTE1 492 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 POU3F4P49335 361 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 EEF1A1P68104 462 aaKnown RBP5.67□□□□□ -1.5
VPS13B-203ENST00000358544 EEF1A2Q05639 463 aaKnown RBP5.67□□□□□ -1.5
VPS13B-203ENST00000358544 SPOCK1Q08629 439 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 EEF1A1P5Q5VTE0 462 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 OPN5Q6U736 354 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 OVCH2Q7RTZ1 564 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 LINC00518Q8N0U6 118 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 CCDC71LQ8N9Z2 235 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 OR56B1Q8NGI3 324 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 OR4D6Q8NGJ1 314 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 OR52I1Q8NGK6 324 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 MEGF10Q96KG7 1140 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 MYADMQ96S97 322 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 ENKD1Q9H0I2 346 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 POU3F3P20264 500 aaPredicted RBP5.67□□□□□ -1.5
VPS13B-203ENST00000358544 HTR1FP30939 366 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 SIRPAP78324 504 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 LRFN4Q6PJG9 635 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 TMEM107Q6UX40 140 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 OR1J1Q8NGS3 322 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 SFT2D1Q8WV19 159 aa5.67□□□□□ -1.5
VPS13B-203ENST00000358544 APH1BQ8WW43 257 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms