RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 OLFM2O95897 454 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 UNGP13051 313 aaPredicted RBP9.14□□□□□ -0.95
CHD3-202ENST00000358181 RPS10P46783 165 aaKnown RBP9.14□□□□□ -0.95
CHD3-202ENST00000358181 HNRNPDQ14103 355 aaKnown RBP9.14□□□□□ -0.95
CHD3-202ENST00000358181 TRAM1Q15629 374 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 MICAQ29983 383 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 ANKRD16Q6P6B7 361 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 ZC3H3Q8IXZ2 948 aaKnown RBP9.14□□□□□ -0.95
CHD3-202ENST00000358181 CPEB3Q8NE35 698 aaKnown RBP9.14□□□□□ -0.95
CHD3-202ENST00000358181 SUSD3Q96L08 255 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 LRR1Q96L50 414 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 CGREF1Q99674 301 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 MENTQ9BUN1 341 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 DUSP22Q9NRW4 184 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 SOD2P04179 222 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 M6PRP20645 277 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 HBMQ6B0K9 141 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 KLHDC8AQ8IYD2 350 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 OR5D14Q8NGL3 314 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 RAB2BQ8WUD1 216 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 ADOQ96SZ5 270 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 OSBPL7Q9BZF2 842 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 ARV1Q9H2C2 271 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 ARPC3O15145 178 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 HNRNPA2B1P22626 353 aaKnown RBP9.13□□□□□ -0.95
CHD3-202ENST00000358181 CRABP1P29762 137 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 PLXDC2Q6UX71 529 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 TMEM139Q8IV31 216 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 SFTPA2Q8IWL1 248 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 SFTPA1Q8IWL2 248 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 FITM2Q8N6M3 262 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 TMEM178AQ8NBL3 297 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 TSSK2Q96PF2 358 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 AMBRA1Q9C0C7 1298 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 ANTXRLA6NF34 631 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 SULT1A3P0DMM9 295 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 SULT1A4P0DMN0 295 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 GSK3BP49841 420 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 PPT1P50897 306 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 PCBD1P61457 104 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 C17orf107Q6ZR85 190 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 WFDC3Q8IUB2 231 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 LSMEM2Q8N112 164 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 SLC29A1Q99808 456 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 EPHX3Q9H6B9 360 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 TXNL4BQ9NX01 149 aaKnown RBP9.13□□□□□ -0.95
CHD3-202ENST00000358181 RAB19A4D1S5 217 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 F6UZH7 168 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 RFPL1O75677 317 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 ADH4P08319 380 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 FOLR1P15328 257 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 UGT2B7P16662 529 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 CSNK1EP49674 416 aaKnown RBP9.13□□□□□ -0.95
CHD3-202ENST00000358181 MTCP1P56278 107 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 UBE2KP61086 200 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 PMP22Q01453 160 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 ADPRMQ3LIE5 342 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 TMEM184AQ6ZMB5 413 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 AAED1Q7RTV5 226 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 LRRC57Q8N9N7 239 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 TCTN2Q96GX1 697 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 OR11A1Q9GZK7 315 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 AP5S1Q9NUS5 200 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 ZDHHC2Q9UIJ5 367 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 ANKRD12Q6UB98 2062 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 H7BYZ3 331 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 FAAHO00519 579 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 DENRO43583 198 aaKnown RBP9.13□□□□□ -0.95
CHD3-202ENST00000358181 SOX15O60248 233 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 SLC22A5O76082 557 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 GYPBP06028 91 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 C1GALT1C1LP0DN25 315 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 C5AR1P21730 350 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 AVPI1Q5T686 147 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 TGIF2LYQ8IUE0 185 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 PNPLA1Q8N8W4 532 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 C10orf82Q8WW14 230 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 ST8SIA4Q92187 359 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 KATNB1Q9BVA0 655 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 CPNE7Q9UBL6 633 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 FAM72CH0Y354 149 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 SPINT2O43291 252 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 TK1P04183 234 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 HOXD8P13378 290 aaPredicted RBP9.13□□□□□ -0.95
CHD3-202ENST00000358181 PITX1P78337 314 aaPredicted RBP9.13□□□□□ -0.95
CHD3-202ENST00000358181 POU3F1Q03052 451 aaPredicted RBP9.13□□□□□ -0.95
CHD3-202ENST00000358181 ZNF74Q16587 644 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 TATDN3Q17R31 274 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 FAM72AQ5TYM5 149 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 PTCRAQ6ISU1 281 aaPredicted RBP9.13□□□□□ -0.95
CHD3-202ENST00000358181 FAM72DQ6L9T8 149 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 DPY19L2P1Q6NXN4 242 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 FAM72BQ86X60 149 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 SIRT6Q8N6T7 355 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 MTMR14Q8NCE2 650 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 PEBP4Q96S96 227 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 IER3IP1Q9Y5U9 82 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 USP3Q9Y6I4 520 aa9.13□□□□□ -0.95
CHD3-202ENST00000358181 BCL9LQ86UU0 1499 aa9.12□□□□□ -0.95
CHD3-202ENST00000358181 SPEF2Q9C093 1822 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms