RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 RFPL3O75679 317 aa13.11□□□□□ -0.31
NIPAL3-203ENST00000358028 MT-ND5P03915 603 aa13.11□□□□□ -0.31
NIPAL3-203ENST00000358028 FTH1P19P0C7X4 201 aa13.11□□□□□ -0.31
NIPAL3-203ENST00000358028 PRR23D2P0DMB1 279 aaPredicted RBP13.11□□□□□ -0.31
NIPAL3-203ENST00000358028 PRKAR1AP10644 381 aa13.11□□□□□ -0.31
NIPAL3-203ENST00000358028 PSMD4P55036 377 aaKnown RBP13.11□□□□□ -0.31
NIPAL3-203ENST00000358028 IFITM2Q01629 132 aa13.11□□□□□ -0.31
NIPAL3-203ENST00000358028 FAM53BQ14153 422 aa13.11□□□□□ -0.31
NIPAL3-203ENST00000358028 ZNF550Q7Z398 422 aa13.11□□□□□ -0.31
NIPAL3-203ENST00000358028 Q8N402 240 aa13.11□□□□□ -0.31
NIPAL3-203ENST00000358028 DUSP18Q8NEJ0 188 aa13.11□□□□□ -0.31
NIPAL3-203ENST00000358028 CAPSLQ8WWF8 208 aa13.11□□□□□ -0.31
NIPAL3-203ENST00000358028 SLC7A6Q92536 515 aa13.11□□□□□ -0.31
NIPAL3-203ENST00000358028 KISS1RQ969F8 398 aaPredicted RBP13.11□□□□□ -0.31
NIPAL3-203ENST00000358028 AHCYL2Q96HN2 611 aaKnown RBP13.11□□□□□ -0.31
NIPAL3-203ENST00000358028 LRFN5Q96NI6 719 aa13.11□□□□□ -0.31
NIPAL3-203ENST00000358028 HCAR1Q9BXC0 346 aa13.11□□□□□ -0.31
NIPAL3-203ENST00000358028 RNF32Q9H0A6 362 aa13.11□□□□□ -0.31
NIPAL3-203ENST00000358028 TP63Q9H3D4 680 aaPredicted RBP13.11□□□□□ -0.31
NIPAL3-203ENST00000358028 Q9N2J8 555 aa13.11□□□□□ -0.31
NIPAL3-203ENST00000358028 RBFOX1Q9NWB1 397 aaKnown RBP13.11□□□□□ -0.31
NIPAL3-203ENST00000358028 HAO2Q9NYQ3 351 aa13.11□□□□□ -0.31
NIPAL3-203ENST00000358028 CLDN16Q9Y5I7 305 aa13.11□□□□□ -0.31
NIPAL3-203ENST00000358028 ZC3H12DA2A288 527 aaKnown RBP13.1□□□□□ -0.31
NIPAL3-203ENST00000358028 NPIPB9F8W1W9 429 aa13.1□□□□□ -0.31
NIPAL3-203ENST00000358028 ADAM11O75078 769 aa13.1□□□□□ -0.31
NIPAL3-203ENST00000358028 GPR3P46089 330 aa13.1□□□□□ -0.31
NIPAL3-203ENST00000358028 NKX2-5P52952 324 aaPredicted RBP13.1□□□□□ -0.31
NIPAL3-203ENST00000358028 ACTC1P68032 377 aa13.1□□□□□ -0.31
NIPAL3-203ENST00000358028 ACTA1P68133 377 aa13.1□□□□□ -0.31
NIPAL3-203ENST00000358028 POU4F2Q12837 409 aa13.1□□□□□ -0.31
NIPAL3-203ENST00000358028 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.1□□□□□ -0.31
NIPAL3-203ENST00000358028 TBRG1Q3YBR2 411 aa13.1□□□□□ -0.31
NIPAL3-203ENST00000358028 CCDC157Q569K6 752 aa13.1□□□□□ -0.31
NIPAL3-203ENST00000358028 B3GLCTQ6Y288 498 aa13.1□□□□□ -0.31
NIPAL3-203ENST00000358028 TPRA1Q86W33 373 aa13.1□□□□□ -0.31
NIPAL3-203ENST00000358028 SDR16C5Q8N3Y7 309 aa13.1□□□□□ -0.31
NIPAL3-203ENST00000358028 TMEM99Q8N816 258 aa13.1□□□□□ -0.31
NIPAL3-203ENST00000358028 LSMEM1Q8N8F7 131 aa13.1□□□□□ -0.31
NIPAL3-203ENST00000358028 SLC37A3Q8NCC5 494 aa13.1□□□□□ -0.31
NIPAL3-203ENST00000358028 RCBTB1Q8NDN9 531 aa13.1□□□□□ -0.31
NIPAL3-203ENST00000358028 DCLRE1CQ96SD1 692 aaKnown RBP13.1□□□□□ -0.31
NIPAL3-203ENST00000358028 TMEM43Q9BTV4 400 aa13.1□□□□□ -0.31
NIPAL3-203ENST00000358028 G6PC3Q9BUM1 346 aa13.1□□□□□ -0.31
NIPAL3-203ENST00000358028 ZNF426Q9BUY5 554 aa13.1□□□□□ -0.31
NIPAL3-203ENST00000358028 MMP28Q9H239 520 aa13.1□□□□□ -0.31
NIPAL3-203ENST00000358028 DDX28Q9NUL7 540 aaKnown RBP13.1□□□□□ -0.31
NIPAL3-203ENST00000358028 LINC00854A0A1B0GVQ3 168 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 SYNDIG1LA6NDD5 238 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 CD8B2A6NJW9 211 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 ZNF749O43361 778 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 PPP1R3DO95685 299 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 CD8BP10966 210 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 MAOAP21397 527 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 APEX1P27695 318 aaKnown RBP13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 KIR2DL3P43628 341 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 PPM1FP49593 454 aaPredicted RBP13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 ATP12AP54707 1039 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 CAV3P56539 151 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 SF3B4Q15427 424 aaKnown RBP eCLIP13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 KLHL12Q53G59 568 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 ALG10BQ5I7T1 473 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 HBMQ6B0K9 141 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 GUSBP11Q6P575 273 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 PLET1Q6UQ28 207 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 METTL27Q8N6F8 245 aaPredicted RBP13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 OR51A7Q8NH64 312 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 MMABQ96EY8 250 aaPredicted RBP13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 ZNF578Q96N58 590 aaPredicted RBP13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 NDC1Q9BTX1 674 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 SOHLH2Q9NX45 425 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 RPS6KB2Q9UBS0 482 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 ERVK-19Q9WJR5 959 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 FREM2Q5SZK8 3169 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 CFAP47Q6ZTR5 3102 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 SMIM30A4D0T7 59 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 TTC36A6NLP5 189 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 A8MU76 341 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 TFECO14948 347 aaPredicted RBP13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 PLPP2O43688 288 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 IFNGP01579 166 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 NGFRP08138 427 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 ZNF3P17036 446 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 HK1P19367 917 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 SLC2A5P22732 501 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 ACP1P24666 158 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 SLC6A6P31641 620 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 PGDP52209 483 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 GFERP55789 205 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 HSD17B7P56937 341 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 FUT7Q11130 342 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 IL18Q14116 193 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 FCRLBQ6BAA4 426 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 ARHGAP11AQ6P4F7 1023 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 LINC00114Q6XXX2 140 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 C17orf82Q86X59 251 aaPredicted RBP13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 CMIPQ8IY22 773 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 CADM2Q8N3J6 435 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 OR5W2Q8NH69 310 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 C16orf52Q8NHV5 167 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms