RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 ZNF252P-AS1Q0IIN9 211 aa5.17□□□□□ -1.58
PTPRD-202ENST00000356435 CTSL3PQ5NE16 218 aa5.17□□□□□ -1.58
PTPRD-202ENST00000356435 RNLSQ5VYX0 342 aa5.17□□□□□ -1.58
PTPRD-202ENST00000356435 ZNF454Q8N9F8 522 aa5.17□□□□□ -1.58
PTPRD-202ENST00000356435 SCCPDHQ8NBX0 429 aa5.17□□□□□ -1.58
PTPRD-202ENST00000356435 PTERQ96BW5 349 aa5.17□□□□□ -1.58
PTPRD-202ENST00000356435 SLC41A2Q96JW4 573 aa5.17□□□□□ -1.58
PTPRD-202ENST00000356435 ATF6BQ99941 703 aa5.17□□□□□ -1.58
PTPRD-202ENST00000356435 KLF16Q9BXK1 252 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-202ENST00000356435 IGSF5Q9NSI5 407 aa5.17□□□□□ -1.58
PTPRD-202ENST00000356435 QPCTLQ9NXS2 382 aa5.17□□□□□ -1.58
PTPRD-202ENST00000356435 INTS6Q9UL03 887 aaKnown RBP5.17□□□□□ -1.58
PTPRD-202ENST00000356435 ATG4BQ9Y4P1 393 aa5.17□□□□□ -1.58
PTPRD-202ENST00000356435 ZNF142P52746 1687 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-202ENST00000356435 ANTXRLA6NF34 631 aa5.17□□□□□ -1.58
PTPRD-202ENST00000356435 RAD1O60671 282 aa5.17□□□□□ -1.58
PTPRD-202ENST00000356435 ETV6P41212 452 aa5.17□□□□□ -1.58
PTPRD-202ENST00000356435 WNT4P56705 351 aa5.17□□□□□ -1.58
PTPRD-202ENST00000356435 RPS18P62269 152 aaKnown RBP5.17□□□□□ -1.58
PTPRD-202ENST00000356435 YOD1Q5VVQ6 348 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-202ENST00000356435 SFRP4Q6FHJ7 346 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-202ENST00000356435 OR52W1Q6IF63 320 aa5.17□□□□□ -1.58
PTPRD-202ENST00000356435 ZNF767PQ75MW2 155 aa5.17□□□□□ -1.58
PTPRD-202ENST00000356435 DEFB123Q8N688 67 aa5.17□□□□□ -1.58
PTPRD-202ENST00000356435 SDR9C7Q8NEX9 313 aa5.17□□□□□ -1.58
PTPRD-202ENST00000356435 NANPQ8TBE9 248 aa5.17□□□□□ -1.58
PTPRD-202ENST00000356435 FUBP1Q96AE4 644 aaKnown RBP5.17□□□□□ -1.58
PTPRD-202ENST00000356435 MED30Q96HR3 178 aa5.17□□□□□ -1.58
PTPRD-202ENST00000356435 SLC6A18Q96N87 628 aa5.17□□□□□ -1.58
PTPRD-202ENST00000356435 CALHM2Q9HA72 323 aa5.17□□□□□ -1.58
PTPRD-202ENST00000356435 MMACHCQ9Y4U1 282 aa5.17□□□□□ -1.58
PTPRD-202ENST00000356435 MYH1P12882 1939 aa5.17□□□□□ -1.58
PTPRD-202ENST00000356435 MYH2Q9UKX2 1941 aa5.17□□□□□ -1.58
PTPRD-202ENST00000356435 MYH4Q9Y623 1939 aa5.17□□□□□ -1.58
PTPRD-202ENST00000356435 ALS2Q96Q42 1657 aa5.17□□□□□ -1.58
PTPRD-202ENST00000356435 HIDE1A8MVS5 230 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 MCRIP1C9JLW8 97 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 ZIC2O95409 532 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-202ENST00000356435 DPP4P27487 766 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 NPBWR1P48145 328 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 RAB40BQ12829 278 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 P2RY14Q15391 338 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 HACD4Q5VWC8 232 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 ZNF322Q6U7Q0 402 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-202ENST00000356435 LINC00696Q6ZRV3 163 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 ZFP41Q8N8Y5 198 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 ZNF419Q96HQ0 510 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-202ENST00000356435 MUS81Q96NY9 551 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 SLX1AQ9BQ83 275 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 CACNG6Q9BXT2 260 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 THSD1Q9NS62 852 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 EBF1Q9UH73 591 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 PTGDR2Q9Y5Y4 395 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 CACNG2Q9Y698 323 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 SLC16A7O60669 478 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 CNIH1O95406 144 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 ZXDBP98169 803 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 SQSTM1Q13501 440 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 FBXW12Q6X9E4 464 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 SYT13Q7L8C5 426 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 OR2T27Q8NH04 317 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 OR5K2Q8NHB8 316 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 ZC3HAV1LQ96H79 300 aaKnown RBP5.16□□□□□ -1.58
PTPRD-202ENST00000356435 KCNJ15Q99712 375 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 KIAA1456Q9P272 454 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 CHD4Q14839 1912 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 M0R3H8 397 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 SULT1B1O43704 296 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 APOA2P02652 100 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 BCKDHBP21953 392 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 MS4A2Q01362 244 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 KCNJ8Q15842 424 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 FAM83HQ6ZRV2 1179 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-202ENST00000356435 SUMF2Q8NBJ7 301 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 HDAC8Q9BY41 377 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 EGLN3Q9H6Z9 239 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 TEX10Q9NXF1 929 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-202ENST00000356435 OBP2AQ9NY56 170 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 MYEF2Q9P2K5 600 aaKnown RBP5.16□□□□□ -1.58
PTPRD-202ENST00000356435 PROCRQ9UNN8 238 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 PCDHGA1Q9Y5H4 931 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 TLCD2A6NGC4 264 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 CRYM-AS1A6NIL9 109 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 E9PI62 339 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 GPR171O14626 319 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 ABCD4O14678 606 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 NXPH2O95156 264 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 TPT1P13693 172 aaKnown RBP5.16□□□□□ -1.58
PTPRD-202ENST00000356435 PTAFRP25105 342 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 CST5P28325 142 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-202ENST00000356435 GJA4P35212 333 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 P2RX1P51575 399 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 TNFRSF17Q02223 184 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 PIP5KL1Q5T9C9 394 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 METTL11BQ5VVY1 283 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 CREB3L2Q70SY1 520 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 CCDC28AQ8IWP9 274 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 RLN3Q8WXF3 142 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 SGPP1Q9BX95 441 aa5.16□□□□□ -1.58
PTPRD-202ENST00000356435 RNF38Q9H0F5 515 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms