RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 NPIPB7O75200 414 aa14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 THBS1P07996 1170 aa14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 DANCRP0C864 163 aa14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 HNRNPCL4P0DMR1 293 aa14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 PTNP21246 168 aa14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 HTR2AP28223 471 aa14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 HTR3AP46098 478 aa14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 CLK1P49759 484 aaKnown RBP14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 EGR4Q05215 589 aa14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 CAPRIN1Q14444 709 aaKnown RBP14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 OR7A5Q15622 319 aa14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 TSPO2Q5TGU0 170 aa14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 FBXW9Q5XUX1 488 aa14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 ADAM5Q6NVV9 412 aa14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 DLEU7Q6UYE1 221 aa14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 YTHDF3Q7Z739 585 aaKnown RBP14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 RETREG3Q86VR2 466 aa14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 LRRC75A-AS1Q8N1F1 130 aa14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 ZNF611Q8N823 705 aa14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 PIGXQ8TBF5 258 aa14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 PMM1Q92871 262 aa14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 PIGTQ969N2 578 aa14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 DDIT4LQ96D03 193 aa14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 PTDSS2Q9BVG9 487 aa14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 HDHD5Q9BXW7 423 aa14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 BCL2L10Q9HD36 194 aa14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 SLC7A10Q9NS82 523 aa14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 INTS9Q9NV88 658 aaKnown RBP14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 ARGLU1Q9NWB6 273 aaPredicted RBP14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 NF1P21359 2839 aa14.72□□□□□ -0.05
PDLIM7-201ENST00000355572 DNPH1O43598 174 aa14.72□□□□□ -0.05
PDLIM7-201ENST00000355572 MAGEA8P43361 318 aa14.72□□□□□ -0.05
PDLIM7-201ENST00000355572 NR1H2P55055 460 aa14.72□□□□□ -0.05
PDLIM7-201ENST00000355572 STX1BP61266 288 aa14.72□□□□□ -0.05
PDLIM7-201ENST00000355572 FAPQ12884 760 aa14.72□□□□□ -0.05
PDLIM7-201ENST00000355572 ADRM1Q16186 407 aa14.72□□□□□ -0.05
PDLIM7-201ENST00000355572 ZNF311Q5JNZ3 666 aa14.72□□□□□ -0.05
PDLIM7-201ENST00000355572 OTUD3Q5T2D3 398 aaPredicted RBP14.72□□□□□ -0.05
PDLIM7-201ENST00000355572 SHEQ5VZ18 495 aa14.72□□□□□ -0.05
PDLIM7-201ENST00000355572 GOLGA6L1Q8N7Z2 621 aa14.72□□□□□ -0.05
PDLIM7-201ENST00000355572 OR52N5Q8NH56 324 aa14.72□□□□□ -0.05
PDLIM7-201ENST00000355572 HSD17B8Q92506 261 aa14.72□□□□□ -0.05
PDLIM7-201ENST00000355572 APH1AQ96BI3 265 aa14.72□□□□□ -0.05
PDLIM7-201ENST00000355572 CPPED1Q9BRF8 314 aaPredicted RBP14.72□□□□□ -0.05
PDLIM7-201ENST00000355572 CALML5Q9NZT1 146 aa14.72□□□□□ -0.05
PDLIM7-201ENST00000355572 MALT1Q9UDY8 824 aa14.72□□□□□ -0.05
PDLIM7-201ENST00000355572 RNF115Q9Y4L5 304 aa14.72□□□□□ -0.05
PDLIM7-201ENST00000355572 OR5H1A6NKK0 313 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 HMGB1P1B2RPK0 211 aaPredicted RBP14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 H7C1Q1 480 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 TPST2O60704 377 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 NDUFS7O75251 213 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 IDUAP35475 653 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 ATP4BP51164 291 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 SLC35A1P78382 337 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 FADDQ13158 208 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 PPA1Q15181 289 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 GABRA6Q16445 453 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 PGGHGQ32M88 737 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 WBP2NLQ6ICG8 309 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 PAQR6Q6TCH4 344 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 CASP12Q6UXS9 341 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 LINGO2Q7L985 606 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 HDXQ7Z353 690 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 PTOV1Q86YD1 416 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 ZNF440Q8IYI8 595 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 WDR31Q8NA23 367 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 DYDC1Q8WWB3 177 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 ZHX1-C8orf76Q96EF9 292 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 C18orf12Q96KH6 178 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 MAGEB18Q96M61 343 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 C1QTNF6Q9BXI9 259 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 GSX2Q9BZM3 304 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 TRIM2Q9C040 744 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 FANCFQ9NPI8 374 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 ZNF701Q9NV72 531 aaPredicted RBP14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 EMC3Q9P0I2 261 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 DCTN4Q9UJW0 460 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 LAMP3Q9UQV4 416 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 SLC25A15Q9Y619 301 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 GMEB1Q9Y692 573 aa14.71□□□□□ -0.05
PDLIM7-201ENST00000355572 PLCE1Q9P212 2302 aa14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 IGKV1D-42A0A075B6H8 117 aa14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 AQP7P3A6NL99 342 aa14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 FTCDNL1E5RQL4 147 aa14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 OVOL3O00110 214 aa14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 EDF1O60869 148 aaKnown RBP14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 CD8AP01732 235 aa14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 INHBBP09529 407 aa14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 FOSL1P15407 271 aa14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 GPX2P18283 190 aa14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 GGT1P19440 569 aa14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 CXCR1P25024 350 aa14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 CDKN1AP38936 164 aa14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 SF3A3Q12874 501 aaKnown RBP eCLIP14.7□□□□□ -0.069e-8■■■■■ 56.8
PDLIM7-201ENST00000355572 GNA13Q14344 377 aa14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 SQLEQ14534 574 aa14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 LARS2Q15031 903 aaKnown RBP14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 ZNF672Q499Z4 452 aaPredicted RBP14.7□□□□□ -0.06
PDLIM7-201ENST00000355572 TIMM23BQ5SRD1 257 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms