RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 C17orf105B2RV13 164 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 ARL6IP5O75915 188 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 TFP02787 698 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 CLPSP04118 112 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 RAB3BP20337 219 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 HOXD12P35452 270 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 RPS4XP62701 263 aaKnown RBP20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 SIRPAP78324 504 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 FAM27D1Q5T7N8 215 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 RPTNQ6XPR3 784 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 MED25Q71SY5 747 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 SAMD12Q8N8I0 201 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 SMAP2Q8WU79 429 aaPredicted RBP20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 THAP4Q8WY91 577 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 ZDHHC12Q96GR4 267 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 TGM7Q96PF1 710 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 DDOQ99489 341 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 MFRPQ9BY79 579 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 CHRDQ9H2X0 955 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 EXOSC3Q9NQT5 275 aaKnown RBP20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 MMACHCQ9Y4U1 282 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 CACNA1IQ9P0X4 2223 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 IGHV5-51A0A0C4DH38 117 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 ELOA3DA6NLF2 546 aaPredicted RBP20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 METTL12A8MUP2 240 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 RGS13O14921 159 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 GATBO75879 557 aaKnown RBP20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 FAM157BP0CG42 384 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 GRK6P43250 576 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 PPICP45877 212 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 PITPNBP48739 271 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 CDK5R1Q15078 307 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 ELOA3BQ3SY89 546 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 TP53I3Q53FA7 332 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 HACD4Q5VWC8 232 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 CHRDL2Q6WN34 429 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 SDR16C5Q8N3Y7 309 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 C7orf57Q8NEG2 295 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 ELOA3Q8NG57 546 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 LIPHQ8WWY8 451 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 PELI1Q96FA3 418 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 TPSD1Q9BZJ3 242 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 SPRTNQ9H040 489 aaPredicted RBP20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 TP63Q9H3D4 680 aaPredicted RBP20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 MRTO4Q9UKD2 239 aaKnown RBP20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 CA14Q9ULX7 337 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 SPTBN5Q9NRC6 3674 aaKnown RBP20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 A0A0G2JK05 382 aa20.37■□□□□ 0.85
NKX2-1-201ENST00000354822 A0A0G2JMP0 313 aa20.37■□□□□ 0.85
NKX2-1-201ENST00000354822 A0A0X1KG70 313 aa20.37■□□□□ 0.85
NKX2-1-201ENST00000354822 IL33O95760 270 aa20.37■□□□□ 0.85
NKX2-1-201ENST00000354822 ZNF57Q68EA5 555 aaPredicted RBP20.37■□□□□ 0.85
NKX2-1-201ENST00000354822 METTL27Q8N6F8 245 aaPredicted RBP20.37■□□□□ 0.85
NKX2-1-201ENST00000354822 OR4M2Q8NGB6 313 aa20.37■□□□□ 0.85
NKX2-1-201ENST00000354822 PHYHIPQ92561 330 aa20.37■□□□□ 0.85
NKX2-1-201ENST00000354822 SLC46A1Q96NT5 459 aa20.37■□□□□ 0.85
NKX2-1-201ENST00000354822 MARVELD1Q9BSK0 173 aa20.37■□□□□ 0.85
NKX2-1-201ENST00000354822 NMNAT2Q9BZQ4 307 aa20.37■□□□□ 0.85
NKX2-1-201ENST00000354822 RBMX2Q9Y388 322 aaKnown RBP20.37■□□□□ 0.85
NKX2-1-201ENST00000354822 ADAM18Q9Y3Q7 739 aa20.37■□□□□ 0.85
NKX2-1-201ENST00000354822 TMEM184BQ9Y519 407 aaPredicted RBP20.37■□□□□ 0.85
NKX2-1-201ENST00000354822 DNAH14Q0VDD8 3507 aa20.37■□□□□ 0.85
NKX2-1-201ENST00000354822 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 FAM172BPA6NC97 362 aa20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 SCDO00767 359 aa20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 GSTT2P0CG29 244 aa20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 GSTT2BP0CG30 244 aa20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 GDI2P50395 445 aaKnown RBP20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 CLDN20P56880 219 aa20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 IFITM2Q01629 132 aa20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 FNDC7Q5VTL7 733 aa20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 ZSCAN1Q8NBB4 408 aa20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 UBASH3BQ8TF42 649 aa20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 NMNAT3Q96T66 252 aa20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 HDHD2Q9H0R4 259 aa20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 PRO3102Q9H379 93 aa20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 KLHL1Q9NR64 748 aa20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 ABRACLQ9P1F3 81 aa20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 NUFIP1Q9UHK0 495 aaKnown RBP20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 GMEB2Q9UKD1 530 aa20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 SLC43A1O75387 559 aa20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 UBL4AP11441 157 aa20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 APEHP13798 732 aaKnown RBP20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 SPI1P17947 270 aa20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 RORAP35398 523 aa20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 HCCSP53701 268 aa20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 GFERP55789 205 aa20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 OR10A3P58181 314 aa20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 RACK1P63244 317 aaKnown RBP20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 TATDN3Q17R31 274 aa20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 PYHIN1Q6K0P9 492 aa20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 OR4M1Q8NGD0 313 aa20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 TRMT10AQ8TBZ6 339 aaKnown RBP20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 RFT1Q96AA3 541 aa20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 THAP7Q9BT49 309 aaPredicted RBP20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 PCED1AQ9H1Q7 454 aa20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 ZCCHC4Q9H5U6 513 aa20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 WDR70Q9NW82 654 aa20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 SLC6A5Q9Y345 797 aa20.36■□□□□ 0.85
NKX2-1-201ENST00000354822 A0A1W2PRG6 482 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms