RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 GMFGO60234 142 aa12.28□□□□□ -0.44
UBA3-201ENST00000349511 ADAM11O75078 769 aa12.28□□□□□ -0.44
UBA3-201ENST00000349511 REM1O75628 298 aa12.28□□□□□ -0.44
UBA3-201ENST00000349511 STK17BO94768 372 aa12.28□□□□□ -0.44
UBA3-201ENST00000349511 MT-CO3P00414 261 aa12.28□□□□□ -0.44
UBA3-201ENST00000349511 THBS1P07996 1170 aa12.28□□□□□ -0.44
UBA3-201ENST00000349511 TRAPPC2P0DI81 140 aa12.28□□□□□ -0.44
UBA3-201ENST00000349511 TRAPPC2BP0DI82 140 aa12.28□□□□□ -0.44
UBA3-201ENST00000349511 MTNR1AP48039 350 aa12.28□□□□□ -0.44
UBA3-201ENST00000349511 GPR143P51810 404 aa12.28□□□□□ -0.44
UBA3-201ENST00000349511 FABP5Q01469 135 aa12.28□□□□□ -0.44
UBA3-201ENST00000349511 DECR1Q16698 335 aa12.28□□□□□ -0.44
UBA3-201ENST00000349511 SLC35F1Q5T1Q4 408 aa12.28□□□□□ -0.44
UBA3-201ENST00000349511 HES3Q5TGS1 186 aa12.28□□□□□ -0.44
UBA3-201ENST00000349511 PLEKHM3Q6ZWE6 761 aa12.28□□□□□ -0.44
UBA3-201ENST00000349511 SLC29A4Q7RTT9 530 aa12.28□□□□□ -0.44
UBA3-201ENST00000349511 MRGPREQ86SM8 312 aa12.28□□□□□ -0.44
UBA3-201ENST00000349511 NKAIN4Q8IVV8 208 aa12.28□□□□□ -0.44
UBA3-201ENST00000349511 ZFP41Q8N8Y5 198 aa12.28□□□□□ -0.44
UBA3-201ENST00000349511 ANKK1Q8NFD2 765 aa12.28□□□□□ -0.44
UBA3-201ENST00000349511 CDC6Q99741 560 aa12.28□□□□□ -0.44
UBA3-201ENST00000349511 G6PC3Q9BUM1 346 aa12.28□□□□□ -0.44
UBA3-201ENST00000349511 WWTR1Q9GZV5 400 aa12.28□□□□□ -0.44
UBA3-201ENST00000349511 ZNF223Q9UK11 482 aaPredicted RBP12.28□□□□□ -0.44
UBA3-201ENST00000349511 EXOSC1Q9Y3B2 195 aaKnown RBP12.28□□□□□ -0.44
UBA3-201ENST00000349511 PTRH2Q9Y3E5 179 aaKnown RBP12.28□□□□□ -0.44
UBA3-201ENST00000349511 SNTNA6NMZ2 147 aa12.27□□□□□ -0.45
UBA3-201ENST00000349511 C17orf51A8MQB3 221 aa12.27□□□□□ -0.45
UBA3-201ENST00000349511 KDM4EB2RXH2 506 aaPredicted RBP12.27□□□□□ -0.45
UBA3-201ENST00000349511 B4DXG7 233 aa12.27□□□□□ -0.45
UBA3-201ENST00000349511 PLA2G10O15496 165 aa12.27□□□□□ -0.45
UBA3-201ENST00000349511 LIMS3P0CW19 117 aa12.27□□□□□ -0.45
UBA3-201ENST00000349511 LIMS4P0CW20 117 aa12.27□□□□□ -0.45
UBA3-201ENST00000349511 HTR2AP28223 471 aa12.27□□□□□ -0.45
UBA3-201ENST00000349511 RPS18P62269 152 aaKnown RBP12.27□□□□□ -0.45
UBA3-201ENST00000349511 STPG1Q5TH74 334 aa12.27□□□□□ -0.45
UBA3-201ENST00000349511 FAM198BQ6UWH4 519 aa12.27□□□□□ -0.45
UBA3-201ENST00000349511 ZNF730Q6ZMV8 503 aa12.27□□□□□ -0.45
UBA3-201ENST00000349511 CPEB2Q7Z5Q1 589 aaKnown RBP12.27□□□□□ -0.45
UBA3-201ENST00000349511 UBE2J2Q8N2K1 259 aa12.27□□□□□ -0.45
UBA3-201ENST00000349511 APCDD1LQ8NCL9 501 aa12.27□□□□□ -0.45
UBA3-201ENST00000349511 AP3S1Q92572 193 aa12.27□□□□□ -0.45
UBA3-201ENST00000349511 ART5Q96L15 291 aa12.27□□□□□ -0.45
UBA3-201ENST00000349511 WDR77Q9BQA1 342 aaPredicted RBP12.27□□□□□ -0.45
UBA3-201ENST00000349511 ARHGAP9Q9BRR9 750 aa12.27□□□□□ -0.45
UBA3-201ENST00000349511 CNIH4Q9P003 139 aa12.27□□□□□ -0.45
UBA3-201ENST00000349511 NUFIP1Q9UHK0 495 aaKnown RBP12.27□□□□□ -0.45
UBA3-201ENST00000349511 GSTK1Q9Y2Q3 226 aa12.27□□□□□ -0.45
UBA3-201ENST00000349511 NOX1Q9Y5S8 564 aa12.27□□□□□ -0.45
UBA3-201ENST00000349511 B4E171 279 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 MASP2O00187 686 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 GABRA5P31644 462 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 TSPAN7P41732 249 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 KIR2DL3P43628 341 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 ATP12AP54707 1039 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 E2F1Q01094 437 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 TSPAN31Q12999 210 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 CDK10Q15131 360 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 EIPR1Q53HC9 387 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 CLEC12AQ5QGZ9 265 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 TIPARPQ7Z3E1 657 aaKnown RBP12.26□□□□□ -0.45
UBA3-201ENST00000349511 LHFPL3Q86UP9 236 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 OR5M3Q8NGP4 307 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 GRHL3Q8TE85 626 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 SLC7A6Q92536 515 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 DIO2Q92813 273 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 KIAA1143Q96AT1 154 aaPredicted RBP12.26□□□□□ -0.45
UBA3-201ENST00000349511 SLC41A3Q96GZ6 507 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 FAM46AQ96IP4 442 aaKnown RBP12.26□□□□□ -0.45
UBA3-201ENST00000349511 SLC38A2Q96QD8 506 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 SLC26A1Q9H2B4 701 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 POLE3Q9NRF9 147 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 COMMD3Q9UBI1 195 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 SLC7A7Q9UM01 511 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 BOLA1Q9Y3E2 137 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 SPAARA0A1B0GVQ0 90 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 SYNDIG1LA6NDD5 238 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 FRG2CA6NGY1 282 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 KLF7O75840 302 aaPredicted RBP12.26□□□□□ -0.45
UBA3-201ENST00000349511 ONECUT2O95948 504 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 LALBAP00709 142 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 UMODP07911 640 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 MYL9P24844 172 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 FGF9P31371 208 aaPredicted RBP12.26□□□□□ -0.45
UBA3-201ENST00000349511 IFNGR2P38484 337 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 RNF4P78317 190 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 TRAM2Q15035 370 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.26□□□□□ -0.45
UBA3-201ENST00000349511 APOOLQ6UXV4 268 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 RASSF6Q6ZTQ3 369 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 GDF7Q7Z4P5 450 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 ASCC1Q8N9N2 400 aaKnown RBP12.26□□□□□ -0.45
UBA3-201ENST00000349511 ZNF485Q8NCK3 441 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 NFAM1Q8NET5 270 aaPredicted RBP12.26□□□□□ -0.45
UBA3-201ENST00000349511 ATP6V1C2Q8NEY4 427 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 LILRB4Q8NHJ6 448 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 TMEM255BQ8WV15 326 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 DEPDC7Q96QD5 511 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 LPAR4Q99677 370 aa12.26□□□□□ -0.45
UBA3-201ENST00000349511 TTYH2Q9BSA4 534 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms