RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 BCL2L10Q9HD36 194 aa11.73□□□□□ -0.53
CLCC1-202ENST00000348264 INTS9Q9NV88 658 aaKnown RBP11.73□□□□□ -0.53
CLCC1-202ENST00000348264 NPAP1Q9NZP6 1156 aa11.73□□□□□ -0.53
CLCC1-202ENST00000348264 MALT1Q9UDY8 824 aa11.73□□□□□ -0.53
CLCC1-202ENST00000348264 FLVCR1Q9Y5Y0 555 aa11.73□□□□□ -0.53
CLCC1-202ENST00000348264 TRBV5-3A0A0A0MS03 114 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 DPRXA6NFQ7 191 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 LIPT2A6NK58 231 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 ARHGEF9O43307 516 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 EIF1BO60739 113 aaKnown RBP11.72□□□□□ -0.53
CLCC1-202ENST00000348264 RAD51DO75771 328 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 PGM3O95394 542 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 CD3EP07766 207 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 ARAFP10398 606 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 GGT1P19440 569 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 CXCR1P25024 350 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 IDUAP35475 653 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 PTH2RP49190 550 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 MAP2K6P52564 334 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 HOXC5Q00444 222 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 CEACAM7Q14002 265 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 SLC17A1Q14916 467 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 PPA1Q15181 289 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 OR7A5Q15622 319 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 AGKQ53H12 422 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 ZNF311Q5JNZ3 666 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 PRAMEF8Q5VWM4 474 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 PRAMEF7Q5VXH5 474 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 PAQR6Q6TCH4 344 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 CASP12Q6UXS9 341 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 HDXQ7Z353 690 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 YTHDF3Q7Z739 585 aaKnown RBP11.72□□□□□ -0.53
CLCC1-202ENST00000348264 COMTD1Q86VU5 262 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 UBE2J2Q8N2K1 259 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 KBTBD8Q8NFY9 601 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 OR52E4Q8NGH9 312 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 NFKBIDQ8NI38 313 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 BBS10Q8TAM1 723 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 CKAP2Q8WWK9 683 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 C3orf49Q96BT1 292 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 THOC1Q96FV9 657 aaKnown RBP11.72□□□□□ -0.53
CLCC1-202ENST00000348264 C18orf12Q96KH6 178 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 Q96MF0 132 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 USB1Q9BQ65 265 aaKnown RBP11.72□□□□□ -0.53
CLCC1-202ENST00000348264 GSX2Q9BZM3 304 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 ESRP2Q9H6T0 727 aaKnown RBP11.72□□□□□ -0.53
CLCC1-202ENST00000348264 NGBQ9NPG2 151 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 VAPAQ9P0L0 249 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 IFT52Q9Y366 437 aa11.72□□□□□ -0.53
CLCC1-202ENST00000348264 OR5H1A6NKK0 313 aa11.71□□□□□ -0.53
CLCC1-202ENST00000348264 TMEM229AB2RXF0 380 aa11.71□□□□□ -0.53
CLCC1-202ENST00000348264 MRPL33O75394 65 aaKnown RBP11.71□□□□□ -0.53
CLCC1-202ENST00000348264 AKR7A3O95154 331 aa11.71□□□□□ -0.53
CLCC1-202ENST00000348264 GPIP06744 558 aa11.71□□□□□ -0.53
CLCC1-202ENST00000348264 ITGA5P08648 1049 aa11.71□□□□□ -0.53
CLCC1-202ENST00000348264 NCF2P19878 526 aaPredicted RBP11.71□□□□□ -0.53
CLCC1-202ENST00000348264 ATP4BP51164 291 aa11.71□□□□□ -0.53
CLCC1-202ENST00000348264 COPZ1P61923 177 aa11.71□□□□□ -0.53
CLCC1-202ENST00000348264 SQLEQ14534 574 aa11.71□□□□□ -0.53
CLCC1-202ENST00000348264 ZSWIM7Q19AV6 140 aa11.71□□□□□ -0.53
CLCC1-202ENST00000348264 TIMM23BQ5SRD1 257 aa11.71□□□□□ -0.53
CLCC1-202ENST00000348264 OTUD3Q5T2D3 398 aaPredicted RBP11.71□□□□□ -0.53
CLCC1-202ENST00000348264 GCNT6Q5T4J0 391 aa11.71□□□□□ -0.53
CLCC1-202ENST00000348264 ADAM5Q6NVV9 412 aa11.71□□□□□ -0.53
CLCC1-202ENST00000348264 CIARTQ8N365 385 aaPredicted RBP11.71□□□□□ -0.53
CLCC1-202ENST00000348264 TMEM99Q8N816 258 aa11.71□□□□□ -0.53
CLCC1-202ENST00000348264 TMEM171Q8WVE6 324 aa11.71□□□□□ -0.53
CLCC1-202ENST00000348264 NAA11Q9BSU3 229 aaPredicted RBP11.71□□□□□ -0.53
CLCC1-202ENST00000348264 VIPAS39Q9H9C1 493 aa11.71□□□□□ -0.53
CLCC1-202ENST00000348264 CACYBPQ9HB71 228 aaKnown RBP11.71□□□□□ -0.53
CLCC1-202ENST00000348264 ASB6Q9NWX5 421 aa11.71□□□□□ -0.53
CLCC1-202ENST00000348264 ZNF232Q9UNY5 417 aa11.71□□□□□ -0.53
CLCC1-202ENST00000348264 LAMP3Q9UQV4 416 aa11.71□□□□□ -0.53
CLCC1-202ENST00000348264 SLC9A8Q9Y2E8 581 aa11.71□□□□□ -0.53
CLCC1-202ENST00000348264 SONP18583 2426 aaKnown RBP11.7□□□□□ -0.54
CLCC1-202ENST00000348264 A0A1W2PR80 420 aa11.7□□□□□ -0.54
CLCC1-202ENST00000348264 TRIM64A6NGJ6 449 aa11.7□□□□□ -0.54
CLCC1-202ENST00000348264 TRIM64BA6NI03 449 aa11.7□□□□□ -0.54
CLCC1-202ENST00000348264 AQP7P3A6NL99 342 aa11.7□□□□□ -0.54
CLCC1-202ENST00000348264 A8MVM7 634 aa11.7□□□□□ -0.54
CLCC1-202ENST00000348264 C5orf58C9J3I9 102 aa11.7□□□□□ -0.54
CLCC1-202ENST00000348264 PDLIM1O00151 329 aa11.7□□□□□ -0.54
CLCC1-202ENST00000348264 NPIPB7O75200 414 aa11.7□□□□□ -0.54
CLCC1-202ENST00000348264 SASH3O75995 380 aa11.7□□□□□ -0.54
CLCC1-202ENST00000348264 SOD3P08294 240 aa11.7□□□□□ -0.54
CLCC1-202ENST00000348264 INHBBP09529 407 aa11.7□□□□□ -0.54
CLCC1-202ENST00000348264 ETS2P15036 469 aa11.7□□□□□ -0.54
CLCC1-202ENST00000348264 PAX1P15863 534 aa11.7□□□□□ -0.54
CLCC1-202ENST00000348264 P2RY4P51582 365 aa11.7□□□□□ -0.54
CLCC1-202ENST00000348264 FAPQ12884 760 aa11.7□□□□□ -0.54
CLCC1-202ENST00000348264 ZNF672Q499Z4 452 aaPredicted RBP11.7□□□□□ -0.54
CLCC1-202ENST00000348264 C1orf140Q5VVS0 124 aa11.7□□□□□ -0.54
CLCC1-202ENST00000348264 PRSS57Q6UWY2 283 aa11.7□□□□□ -0.54
CLCC1-202ENST00000348264 BIVMQ86UB2 503 aa11.7□□□□□ -0.54
CLCC1-202ENST00000348264 ZIC4Q8N9L1 334 aa11.7□□□□□ -0.54
CLCC1-202ENST00000348264 OR9K2Q8NGE7 335 aa11.7□□□□□ -0.54
CLCC1-202ENST00000348264 OR52N5Q8NH56 324 aa11.7□□□□□ -0.54
CLCC1-202ENST00000348264 STON2Q8WXE9 905 aa11.7□□□□□ -0.54
CLCC1-202ENST00000348264 FBXW5Q969U6 566 aa11.7□□□□□ -0.54
CLCC1-202ENST00000348264 TMEM45BQ96B21 275 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms