RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 RPS10P5Q9NQ39 176 aa21.53■■□□□ 1.04
NPAS3-201ENST00000346562 BABAM2Q9NXR7 383 aa21.53■■□□□ 1.04
NPAS3-201ENST00000346562 ZNF254O75437 659 aa21.53■■□□□ 1.04
NPAS3-201ENST00000346562 MRPL2Q5T653 305 aaKnown RBP21.53■■□□□ 1.04
NPAS3-201ENST00000346562 TMEM71Q6P5X7 295 aa21.53■■□□□ 1.04
NPAS3-201ENST00000346562 NPSR1Q6W5P4 371 aa21.53■■□□□ 1.04
NPAS3-201ENST00000346562 OR56B1Q8NGI3 324 aa21.53■■□□□ 1.04
NPAS3-201ENST00000346562 TCTEX1D2Q8WW35 142 aa21.53■■□□□ 1.04
NPAS3-201ENST00000346562 PDLIM5Q96HC4 596 aaKnown RBP21.53■■□□□ 1.04
NPAS3-201ENST00000346562 MFFQ9GZY8 342 aa21.53■■□□□ 1.04
NPAS3-201ENST00000346562 C1orf198Q9H425 327 aa21.53■■□□□ 1.04
NPAS3-201ENST00000346562 FKRPQ9H9S5 495 aa21.53■■□□□ 1.04
NPAS3-201ENST00000346562 CSNK1G1Q9HCP0 422 aa21.53■■□□□ 1.04
NPAS3-201ENST00000346562 A0A1B0GTW7 788 aa21.53■■□□□ 1.04
NPAS3-201ENST00000346562 ZNF705FA8MVS1 300 aaPredicted RBP21.53■■□□□ 1.04
NPAS3-201ENST00000346562 ZNF705DP0CH99 300 aaPredicted RBP21.53■■□□□ 1.04
NPAS3-201ENST00000346562 ZNF705BP0CI00 300 aaPredicted RBP21.53■■□□□ 1.04
NPAS3-201ENST00000346562 WNT7BP56706 349 aa21.53■■□□□ 1.04
NPAS3-201ENST00000346562 CXADRP78310 365 aa21.53■■□□□ 1.04
NPAS3-201ENST00000346562 IKZF1Q13422 519 aa21.53■■□□□ 1.04
NPAS3-201ENST00000346562 RAB40ALP0C0E4 278 aa21.53■■□□□ 1.04
NPAS3-201ENST00000346562 OPRD1P41143 372 aa21.53■■□□□ 1.04
NPAS3-201ENST00000346562 PAN3Q58A45 887 aaKnown RBP21.53■■□□□ 1.04
NPAS3-201ENST00000346562 PTCRAQ6ISU1 281 aaPredicted RBP21.53■■□□□ 1.04
NPAS3-201ENST00000346562 GAREM2Q75VX8 874 aa21.53■■□□□ 1.04
NPAS3-201ENST00000346562 COX15Q7KZN9 410 aa21.53■■□□□ 1.04
NPAS3-201ENST00000346562 RAB40AQ8WXH6 277 aa21.53■■□□□ 1.04
NPAS3-201ENST00000346562 SHISA4Q96DD7 197 aa21.53■■□□□ 1.04
NPAS3-201ENST00000346562 SAGE1Q9NXZ1 904 aa21.53■■□□□ 1.04
NPAS3-201ENST00000346562 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.53■■□□□ 1.04
NPAS3-201ENST00000346562 KLRC4-KLRK1H3BQV0 150 aa21.52■■□□□ 1.04
NPAS3-201ENST00000346562 C12orf45Q8N5I9 185 aaPredicted RBP21.52■■□□□ 1.04
NPAS3-201ENST00000346562 ESX1Q8N693 406 aa21.52■■□□□ 1.04
NPAS3-201ENST00000346562 SNRPD2P62316 118 aaKnown RBP21.52■■□□□ 1.04
NPAS3-201ENST00000346562 TAZQ16635 292 aa21.52■■□□□ 1.04
NPAS3-201ENST00000346562 ARNT2Q9HBZ2 717 aa21.52■■□□□ 1.04
NPAS3-201ENST00000346562 DDAH2O95865 285 aa21.52■■□□□ 1.04
NPAS3-201ENST00000346562 CD163Q86VB7 1156 aa21.52■■□□□ 1.04
NPAS3-201ENST00000346562 BOD1Q96IK1 185 aa21.52■■□□□ 1.04
NPAS3-201ENST00000346562 SLC6A18Q96N87 628 aa21.52■■□□□ 1.04
NPAS3-201ENST00000346562 UHRF2Q96PU4 802 aa21.52■■□□□ 1.04
NPAS3-201ENST00000346562 NOX3Q9HBY0 568 aa21.52■■□□□ 1.04
NPAS3-201ENST00000346562 PTGER1P34995 402 aa21.52■■□□□ 1.03
NPAS3-201ENST00000346562 MMP12P39900 470 aa21.52■■□□□ 1.03
NPAS3-201ENST00000346562 KCNIP4Q6PIL6 250 aa21.52■■□□□ 1.03
NPAS3-201ENST00000346562 HDAC8Q9BY41 377 aa21.52■■□□□ 1.03
NPAS3-201ENST00000346562 HLA-DMAP28067 261 aa21.51■■□□□ 1.03
NPAS3-201ENST00000346562 CARD18P57730 90 aa21.51■■□□□ 1.03
NPAS3-201ENST00000346562 GGTA1PQ4G0N0 100 aa21.51■■□□□ 1.03
NPAS3-201ENST00000346562 GLB1L2Q8IW92 636 aa21.51■■□□□ 1.03
NPAS3-201ENST00000346562 ARRDC3Q96B67 414 aa21.51■■□□□ 1.03
NPAS3-201ENST00000346562 EPHX3Q9H6B9 360 aa21.51■■□□□ 1.03
NPAS3-201ENST00000346562 ADAM23O75077 832 aa21.51■■□□□ 1.03
NPAS3-201ENST00000346562 HLA-FP30511 346 aa21.51■■□□□ 1.03
NPAS3-201ENST00000346562 OR8B8Q15620 311 aa21.51■■□□□ 1.03
NPAS3-201ENST00000346562 CNTN4Q8IWV2 1026 aa21.51■■□□□ 1.03
NPAS3-201ENST00000346562 OR4A16Q8NH70 328 aa21.51■■□□□ 1.03
NPAS3-201ENST00000346562 ANKRD9Q96BM1 317 aaPredicted RBP21.51■■□□□ 1.03
NPAS3-201ENST00000346562 MRPS2Q9Y399 296 aaKnown RBP21.51■■□□□ 1.03
NPAS3-201ENST00000346562 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.51■■□□□ 1.03
NPAS3-201ENST00000346562 ZNF814B7Z6K7 855 aa21.51■■□□□ 1.03
NPAS3-201ENST00000346562 EDN1P05305 212 aa21.51■■□□□ 1.03
NPAS3-201ENST00000346562 CSNK1EP49674 416 aaKnown RBP21.51■■□□□ 1.03
NPAS3-201ENST00000346562 CYP4V2Q6ZWL3 525 aaPredicted RBP21.51■■□□□ 1.03
NPAS3-201ENST00000346562 TMPRSS7Q7RTY8 843 aa21.51■■□□□ 1.03
NPAS3-201ENST00000346562 SLAMF9Q96A28 289 aa21.51■■□□□ 1.03
NPAS3-201ENST00000346562 HRASLSQ9HDD0 168 aa21.51■■□□□ 1.03
NPAS3-201ENST00000346562 RFPL3O75679 317 aa21.51■■□□□ 1.03
NPAS3-201ENST00000346562 LTC4SQ16873 150 aa21.51■■□□□ 1.03
NPAS3-201ENST00000346562 ZNF585AQ6P3V2 769 aa21.51■■□□□ 1.03
NPAS3-201ENST00000346562 B3GAT1Q9P2W7 334 aa21.51■■□□□ 1.03
NPAS3-201ENST00000346562 ZNF587BE7ETH6 402 aa21.51■■□□□ 1.03
NPAS3-201ENST00000346562 FOXD2O60548 495 aaPredicted RBP21.51■■□□□ 1.03
NPAS3-201ENST00000346562 F13BP05160 661 aa21.51■■□□□ 1.03
NPAS3-201ENST00000346562 MTCP1P56278 107 aa21.51■■□□□ 1.03
NPAS3-201ENST00000346562 AMIGO3Q86WK7 504 aa21.51■■□□□ 1.03
NPAS3-201ENST00000346562 LRRC28Q86X40 367 aaPredicted RBP21.51■■□□□ 1.03
NPAS3-201ENST00000346562 SMIM3Q9BZL3 60 aa21.51■■□□□ 1.03
NPAS3-201ENST00000346562 GPR45Q9Y5Y3 372 aa21.51■■□□□ 1.03
NPAS3-201ENST00000346562 LRP6O75581 1613 aa21.51■■□□□ 1.03
NPAS3-201ENST00000346562 TRAV36DV7A0A075B6V5 113 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 TSPAN11A1L157 253 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 ZNF593O00488 134 aaPredicted RBP21.5■■□□□ 1.03
NPAS3-201ENST00000346562 MT-ND4P03905 459 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 BMP1P13497 986 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 MFGE8Q08431 387 aaPredicted RBP21.5■■□□□ 1.03
NPAS3-201ENST00000346562 SYPL1Q16563 259 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 ADAMTSL4Q6UY14 1074 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 OR51E2Q9H255 320 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 CALHM2Q9HA72 323 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 CXXC1Q9P0U4 656 aaPredicted RBP21.5■■□□□ 1.03
NPAS3-201ENST00000346562 SERINC4A6NH21 518 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 TMEM212A6NML5 194 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 ZNF891A8MT65 544 aaPredicted RBP21.5■■□□□ 1.03
NPAS3-201ENST00000346562 EIF1BO60739 113 aaKnown RBP21.5■■□□□ 1.03
NPAS3-201ENST00000346562 HPGDSO60760 199 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 PRDX3P30048 256 aaKnown RBP21.5■■□□□ 1.03
NPAS3-201ENST00000346562 KIR2DL3P43628 341 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 TNK1Q13470 666 aa21.5■■□□□ 1.03
NPAS3-201ENST00000346562 SMAD2Q15796 467 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms