RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 DIO1P49895 249 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 MYBPHQ13203 477 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 MFSD13AQ14CX5 517 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 PON3Q15166 354 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 RNPS1Q15287 305 aaKnown RBP10.62□□□□□ -0.71
SNCA-202ENST00000345009 RTL6Q6ICC9 239 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 VTCN1Q7Z7D3 282 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 ADGRE4PQ86SQ3 457 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 COMTD1Q86VU5 262 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 ZNF808Q8N4W9 903 aaPredicted RBP10.62□□□□□ -0.71
SNCA-202ENST00000345009 MBD3L2Q8NHZ7 208 aaPredicted RBP10.62□□□□□ -0.71
SNCA-202ENST00000345009 ADAMTS16Q8TE57 1224 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 SSC4DQ8WTU2 575 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 CA5BP1Q8WTZ4 195 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 CCDC124Q96CT7 223 aaKnown RBP10.62□□□□□ -0.71
SNCA-202ENST00000345009 SLC7A6OSQ96CW6 309 aaPredicted RBP10.62□□□□□ -0.71
SNCA-202ENST00000345009 CCDC120Q96HB5 630 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 ADGRG7Q96K78 797 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 NAA11Q9BSU3 229 aaPredicted RBP10.62□□□□□ -0.71
SNCA-202ENST00000345009 FNDC11Q9BVV2 318 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 RSPO3Q9BXY4 272 aaPredicted RBP10.62□□□□□ -0.71
SNCA-202ENST00000345009 DOPEY1Q5JWR5 2465 aa10.62□□□□□ -0.71
SNCA-202ENST00000345009 RELNP78509 3460 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 TENM4Q6N022 2769 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 A0A1W2PNR3 127 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 HTR3EA5X5Y0 456 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 H0YC42 278 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 DVL2O14641 736 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 GSC2O15499 205 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 LILRA1O75019 489 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 PDE5AO76074 875 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 PRKD3O94806 890 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 CTSSP25774 331 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 CEACAM8P31997 349 aaPredicted RBP10.61□□□□□ -0.71
SNCA-202ENST00000345009 OPRM1P35372 400 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 CDH12P55289 794 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 TPD52P55327 224 aaPredicted RBP10.61□□□□□ -0.71
SNCA-202ENST00000345009 NUP107P57740 925 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 OR2B6P58173 313 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 SMIM11AP58511 58 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 ST3GAL3Q11203 375 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 CTU2Q2VPK5 515 aaKnown RBP10.61□□□□□ -0.71
SNCA-202ENST00000345009 C1orf140Q5VVS0 124 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 TTC33Q6PID6 262 aaPredicted RBP10.61□□□□□ -0.71
SNCA-202ENST00000345009 RRM2BQ7LG56 351 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 MRGPRGQ86SM5 289 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 RBM45Q8IUH3 476 aaKnown RBP10.61□□□□□ -0.71
SNCA-202ENST00000345009 FNDC9Q8TBE3 224 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 SDCCAG3Q96C92 435 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 LRRC46Q96FV0 321 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 SLC41A3Q96GZ6 507 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 ZNF845Q96IR2 970 aaPredicted RBP10.61□□□□□ -0.71
SNCA-202ENST00000345009 PRRC1Q96M27 445 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 HS6ST2Q96MM7 605 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 TACO1Q9BSH4 297 aaKnown RBP10.61□□□□□ -0.71
SNCA-202ENST00000345009 TMEM43Q9BTV4 400 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 SLC19A3Q9BZV2 496 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 KLHL4Q9C0H6 718 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 OR11A1Q9GZK7 315 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 GP6Q9HCN6 339 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 CLCF1Q9UBD9 225 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 ZNF629Q9UEG4 869 aaPredicted RBP10.61□□□□□ -0.71
SNCA-202ENST00000345009 RIMS3Q9UJD0 308 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 SLC7A7Q9UM01 511 aa10.61□□□□□ -0.71
SNCA-202ENST00000345009 PHF3Q92576 2039 aaKnown RBP10.6□□□□□ -0.71
SNCA-202ENST00000345009 TRAV36DV7A0A075B6V5 113 aa10.6□□□□□ -0.71
SNCA-202ENST00000345009 TMEM229AB2RXF0 380 aa10.6□□□□□ -0.71
SNCA-202ENST00000345009 TPST2O60704 377 aa10.6□□□□□ -0.71
SNCA-202ENST00000345009 ZG16O60844 167 aa10.6□□□□□ -0.71
SNCA-202ENST00000345009 IL18BPO95998 194 aa10.6□□□□□ -0.71
SNCA-202ENST00000345009 LDLRP01130 860 aa10.6□□□□□ -0.71
SNCA-202ENST00000345009 TMIGD3P0DMS9 266 aaPredicted RBP10.6□□□□□ -0.71
SNCA-202ENST00000345009 RHCEP18577 417 aa10.6□□□□□ -0.71
SNCA-202ENST00000345009 TNFRSF1BP20333 461 aa10.6□□□□□ -0.71
SNCA-202ENST00000345009 SHC1P29353 583 aa10.6□□□□□ -0.71
SNCA-202ENST00000345009 RBM34P42696 430 aaKnown RBP10.6□□□□□ -0.71
SNCA-202ENST00000345009 AGFG1P52594 562 aaKnown RBP10.6□□□□□ -0.71
SNCA-202ENST00000345009 CTBP2P56545 445 aa10.6□□□□□ -0.71
SNCA-202ENST00000345009 CHRNB3Q05901 458 aa10.6□□□□□ -0.71
SNCA-202ENST00000345009 PIN1Q13526 163 aaPredicted RBP10.6□□□□□ -0.71
SNCA-202ENST00000345009 NPTX1Q15818 432 aa10.6□□□□□ -0.71
SNCA-202ENST00000345009 ZNF239Q16600 458 aaKnown RBP10.6□□□□□ -0.71
SNCA-202ENST00000345009 FAM98BQ52LJ0 330 aaKnown RBP10.6□□□□□ -0.71
SNCA-202ENST00000345009 LCN8Q6JVE9 175 aa10.6□□□□□ -0.71
SNCA-202ENST00000345009 CYP2R1Q6VVX0 501 aa10.6□□□□□ -0.71
SNCA-202ENST00000345009 FCRLAQ7L513 359 aa10.6□□□□□ -0.71
SNCA-202ENST00000345009 C10orf53Q8N6V4 93 aa10.6□□□□□ -0.71
SNCA-202ENST00000345009 OR4D11Q8NGI4 311 aa10.6□□□□□ -0.71
SNCA-202ENST00000345009 MFSD8Q8NHS3 518 aa10.6□□□□□ -0.71
SNCA-202ENST00000345009 INTS12Q96CB8 462 aaKnown RBP10.6□□□□□ -0.71
SNCA-202ENST00000345009 GMPPAQ96IJ6 420 aaPredicted RBP10.6□□□□□ -0.71
SNCA-202ENST00000345009 CLPTM1LQ96KA5 538 aa10.6□□□□□ -0.71
SNCA-202ENST00000345009 ARL5BQ96KC2 179 aa10.6□□□□□ -0.71
SNCA-202ENST00000345009 ZNF347Q96SE7 839 aa10.6□□□□□ -0.71
SNCA-202ENST00000345009 WFDC6Q9BQY6 131 aa10.6□□□□□ -0.71
SNCA-202ENST00000345009 SFXN3Q9BWM7 321 aa10.6□□□□□ -0.71
SNCA-202ENST00000345009 LRMDAQ9H2I8 198 aa10.6□□□□□ -0.71
SNCA-202ENST00000345009 RNF122Q9H9V4 155 aa10.6□□□□□ -0.71
SNCA-202ENST00000345009 EMC3Q9P0I2 261 aa10.6□□□□□ -0.71
SNCA-202ENST00000345009 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms