RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 DIMT1Q9UNQ2 313 aaKnown RBP12.32□□□□□ -0.44
CDC42-202ENST00000344548 TMEM72A0PK05 275 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 NDUFB2O95178 105 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 F13BP05160 661 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 CYC1P08574 325 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 FBXO45P0C2W1 286 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 ASAH2BP0C7U1 165 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 PGCP20142 388 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 IL11P20809 199 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 TCEA1P23193 301 aaKnown RBP12.32□□□□□ -0.44
CDC42-202ENST00000344548 RGS6P49758 472 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 ERVK-25P63136 954 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 CBFBQ13951 182 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 EFR3AQ14156 821 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 TSTQ16762 297 aaKnown RBP12.32□□□□□ -0.44
CDC42-202ENST00000344548 ZNF791Q3KP31 576 aaPredicted RBP12.32□□□□□ -0.44
CDC42-202ENST00000344548 ZNF468Q5VIY5 522 aaPredicted RBP12.32□□□□□ -0.44
CDC42-202ENST00000344548 PRAMEF20Q5VT98 475 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 NIPAL3Q6P499 406 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 PIP4P1Q86T03 277 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 LRRC75AQ8NAA5 344 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 OR52E2Q8NGJ4 325 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 OR9Q1Q8NGQ5 310 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 TM9SF4Q92544 642 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 FCGR1BQ92637 280 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 RASD2Q96D21 266 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 CDC6Q99741 560 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 PTDSS2Q9BVG9 487 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 SLC19A3Q9BZV2 496 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 OR51V1Q9H2C8 321 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 TAS2R10Q9NYW0 307 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 VDAC3Q9Y277 283 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 ZNF337Q9Y3M9 751 aa12.32□□□□□ -0.44
CDC42-202ENST00000344548 MRPS18BQ9Y676 258 aaKnown RBP12.32□□□□□ -0.44
CDC42-202ENST00000344548 CCDC182A6NF36 153 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 RAB36O95755 333 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 LALBAP00709 142 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 HTR1FP30939 366 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 SLC6A6P31641 620 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 CASP3P42574 277 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 RAB40BQ12829 278 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 NTRK2Q16620 822 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 KLHL12Q53G59 568 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 RPL13AP3Q6NVV1 102 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 IL20RBQ6UXL0 311 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 NUP54Q7Z3B4 507 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 ATCAYQ86WG3 371 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 CYP4Z2PQ8N1L4 340 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 DEFB124Q8NES8 71 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 OR51L1Q8NGJ5 315 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 OR51G2Q8NGK0 314 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 TMCO6Q96DC7 493 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 SPACA9Q96E40 222 aaPredicted RBP12.31□□□□□ -0.44
CDC42-202ENST00000344548 KATNB1Q9BVA0 655 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 DDA1Q9BW61 102 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 PRRG3Q9BZD7 231 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 FGF20Q9NP95 211 aaPredicted RBP12.31□□□□□ -0.44
CDC42-202ENST00000344548 NRIP3Q9NQ35 241 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 NANSQ9NR45 359 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 KLRF1Q9NZS2 232 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 CHCHD2Q9Y6H1 151 aaPredicted RBP12.31□□□□□ -0.44
CDC42-202ENST00000344548 CNTRLQ7Z7A1 2325 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 TMED7-TICAM2A0A0A6YYA0 188 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 NSG1A0A0A6YYJ2 146 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 J3QRE1 110 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 EFNA2O43921 213 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 NPIPB7O75200 414 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 GP1BBP13224 206 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 NAGAP17050 411 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 PRKCAP17252 672 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 CXCR1P25024 350 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 RPS3AP61247 264 aaKnown RBP12.31□□□□□ -0.44
CDC42-202ENST00000344548 C17orf67Q0P5P2 114 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 SPHARQ15513 63 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 ALDH16A1Q8IZ83 802 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 C9orf43Q8TAL5 461 aaPredicted RBP12.31□□□□□ -0.44
CDC42-202ENST00000344548 Q96M85 177 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 NMNAT3Q96T66 252 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 DDOQ99489 341 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 TIMP4Q99727 224 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 CDCP1Q9H5V8 836 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 FBXL2Q9UKC9 423 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 ZNF346Q9UL40 294 aaKnown RBP12.31□□□□□ -0.44
CDC42-202ENST00000344548 ERGIC3Q9Y282 383 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 FARSAQ9Y285 508 aaKnown RBP12.31□□□□□ -0.44
CDC42-202ENST00000344548 HIF3AQ9Y2N7 669 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 TMED7Q9Y3B3 224 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 LOC400499M0QZD8 3231 aa12.31□□□□□ -0.44
CDC42-202ENST00000344548 ZFHX4Q86UP3 3567 aa12.3□□□□□ -0.44
CDC42-202ENST00000344548 CCDC187A0A096LP49 1063 aa12.3□□□□□ -0.44
CDC42-202ENST00000344548 SPAARA0A1B0GVQ0 90 aa12.3□□□□□ -0.44
CDC42-202ENST00000344548 SUSD5O60279 629 aa12.3□□□□□ -0.44
CDC42-202ENST00000344548 SLC2A5P22732 501 aa12.3□□□□□ -0.44
CDC42-202ENST00000344548 RPL4P36578 427 aaKnown RBP12.3□□□□□ -0.44
CDC42-202ENST00000344548 LIMK1P53667 647 aa12.3□□□□□ -0.44
CDC42-202ENST00000344548 IL10RAQ13651 578 aa12.3□□□□□ -0.44
CDC42-202ENST00000344548 B3GNTL1Q67FW5 361 aaPredicted RBP12.3□□□□□ -0.44
CDC42-202ENST00000344548 LYPD4Q6UWN0 246 aa12.3□□□□□ -0.44
CDC42-202ENST00000344548 MEPCEQ7L2J0 689 aaKnown RBP12.3□□□□□ -0.44
CDC42-202ENST00000344548 NDUFAF7Q7L592 441 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms