RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 HIPK4Q8NE63 616 aa14.24□□□□□ -0.13
ATG4B-201ENST00000344376 BHLHE22Q8NFJ8 381 aaPredicted RBP14.24□□□□□ -0.13
ATG4B-201ENST00000344376 HSD17B8Q92506 261 aa14.24□□□□□ -0.13
ATG4B-201ENST00000344376 IKZF5Q9H5V7 419 aa14.24□□□□□ -0.13
ATG4B-201ENST00000344376 BEX4Q9NWD9 120 aaPredicted RBP14.24□□□□□ -0.13
ATG4B-201ENST00000344376 SLC9A8Q9Y2E8 581 aa14.24□□□□□ -0.13
ATG4B-201ENST00000344376 CHST2Q9Y4C5 530 aa14.24□□□□□ -0.13
ATG4B-201ENST00000344376 FRS3O43559 492 aa14.23□□□□□ -0.13
ATG4B-201ENST00000344376 MRPL33O75394 65 aaKnown RBP14.23□□□□□ -0.13
ATG4B-201ENST00000344376 VIMP08670 466 aaKnown RBP14.23□□□□□ -0.13
ATG4B-201ENST00000344376 ARFIP2P53365 341 aa14.23□□□□□ -0.13
ATG4B-201ENST00000344376 NCALDP61601 193 aa14.23□□□□□ -0.13
ATG4B-201ENST00000344376 H3F3AP84243 136 aa14.23□□□□□ -0.13
ATG4B-201ENST00000344376 CEACAM7Q14002 265 aa14.23□□□□□ -0.13
ATG4B-201ENST00000344376 OR7A5Q15622 319 aa14.23□□□□□ -0.13
ATG4B-201ENST00000344376 TSC22D1Q15714 1073 aa14.23□□□□□ -0.13
ATG4B-201ENST00000344376 DHRS4L2Q6PKH6 230 aa14.23□□□□□ -0.13
ATG4B-201ENST00000344376 C20orf204Q6ZNR8 217 aa14.23□□□□□ -0.13
ATG4B-201ENST00000344376 SSX8Q7RTT4 187 aa14.23□□□□□ -0.13
ATG4B-201ENST00000344376 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.23□□□□□ -0.13
ATG4B-201ENST00000344376 C10orf111Q8N326 155 aa14.23□□□□□ -0.13
ATG4B-201ENST00000344376 C11orf65Q8NCR3 313 aa14.23□□□□□ -0.13
ATG4B-201ENST00000344376 C3orf49Q96BT1 292 aa14.23□□□□□ -0.13
ATG4B-201ENST00000344376 PLPPR2Q96GM1 343 aa14.23□□□□□ -0.13
ATG4B-201ENST00000344376 ANKRD27Q96NW4 1050 aa14.23□□□□□ -0.13
ATG4B-201ENST00000344376 HS3ST6Q96QI5 342 aa14.23□□□□□ -0.13
ATG4B-201ENST00000344376 CGREF1Q99674 301 aa14.23□□□□□ -0.13
ATG4B-201ENST00000344376 FGFR1OP2Q9NVK5 253 aa14.23□□□□□ -0.13
ATG4B-201ENST00000344376 PARPBPQ9NWS1 579 aa14.23□□□□□ -0.13
ATG4B-201ENST00000344376 ABCA4P78363 2273 aa14.23□□□□□ -0.13
ATG4B-201ENST00000344376 AKAP6Q13023 2319 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 LIPT2A6NK58 231 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 ELOA3DA6NLF2 546 aaPredicted RBP14.22□□□□□ -0.13
ATG4B-201ENST00000344376 KLF4O43474 513 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 LYZL6O75951 148 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 CD53P19397 219 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 AQP1P29972 269 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 RBBP4Q09028 425 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 BNIP2Q12982 314 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 CAPRIN1Q14444 709 aaKnown RBP14.22□□□□□ -0.13
ATG4B-201ENST00000344376 ACKR1Q16570 336 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 ELOA3BQ3SY89 546 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 OTUD3Q5T2D3 398 aaPredicted RBP14.22□□□□□ -0.13
ATG4B-201ENST00000344376 C1orf140Q5VVS0 124 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 FBXW9Q5XUX1 488 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 CASP12Q6UXS9 341 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 ATG4DQ86TL0 474 aaPredicted RBP14.22□□□□□ -0.13
ATG4B-201ENST00000344376 RETREG3Q86VR2 466 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 ARMC8Q8IUR7 673 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 ELOA3Q8NG57 546 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 STK35Q8TDR2 534 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 PIGTQ969N2 578 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 SELENONQ9NZV5 590 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 RAMP1O60894 148 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 AHSA1O95433 338 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 COX5AP20674 150 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 LOXP28300 417 aaPredicted RBP14.22□□□□□ -0.13
ATG4B-201ENST00000344376 MTPNP58546 118 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 HOXC5Q00444 222 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 MAPRE2Q15555 327 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 TAB1Q15750 504 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 STK11Q15831 433 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 ZNF704Q6ZNC4 412 aaPredicted RBP14.22□□□□□ -0.13
ATG4B-201ENST00000344376 SLC30A8Q8IWU4 369 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 MUCL1Q96DR8 90 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 SF3B5Q9BWJ5 86 aaKnown RBP14.22□□□□□ -0.13
ATG4B-201ENST00000344376 TRIM2Q9C040 744 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 ESRP2Q9H6T0 727 aaKnown RBP14.22□□□□□ -0.13
ATG4B-201ENST00000344376 EVA1AQ9H8M9 152 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 C12orf10Q9HB07 376 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 ASB6Q9NWX5 421 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 ADPRHL2Q9NX46 363 aa14.22□□□□□ -0.13
ATG4B-201ENST00000344376 CELSR1Q9NYQ6 3014 aa14.21□□□□□ -0.14
ATG4B-201ENST00000344376 TMEM229AB2RXF0 380 aa14.21□□□□□ -0.14
ATG4B-201ENST00000344376 AKR7A3O95154 331 aa14.21□□□□□ -0.14
ATG4B-201ENST00000344376 GGT1P19440 569 aa14.21□□□□□ -0.14
ATG4B-201ENST00000344376 IGHV1-2P23083 117 aa14.21□□□□□ -0.14
ATG4B-201ENST00000344376 EDNRAP25101 427 aa14.21□□□□□ -0.14
ATG4B-201ENST00000344376 GTF2E2P29084 291 aaKnown RBP14.21□□□□□ -0.14
ATG4B-201ENST00000344376 ADSLP30566 484 aaPredicted RBP14.21□□□□□ -0.14
ATG4B-201ENST00000344376 RGS8P57771 180 aaPredicted RBP14.21□□□□□ -0.14
ATG4B-201ENST00000344376 SLC17A1Q14916 467 aa14.21□□□□□ -0.14
ATG4B-201ENST00000344376 ADRM1Q16186 407 aa14.21□□□□□ -0.14
ATG4B-201ENST00000344376 OR52E4Q8NGH9 312 aa14.21□□□□□ -0.14
ATG4B-201ENST00000344376 DNAJA4Q8WW22 397 aaPredicted RBP14.21□□□□□ -0.14
ATG4B-201ENST00000344376 CCL19Q99731 98 aa14.21□□□□□ -0.14
ATG4B-201ENST00000344376 PIF1Q9H611 641 aa14.21□□□□□ -0.14
ATG4B-201ENST00000344376 TESQ9UGI8 421 aaKnown RBP14.21□□□□□ -0.14
ATG4B-201ENST00000344376 FLVCR1Q9Y5Y0 555 aa14.21□□□□□ -0.14
ATG4B-201ENST00000344376 F8P00451 2351 aa14.21□□□□□ -0.14
ATG4B-201ENST00000344376 CIB4A0PJX0 185 aa14.2□□□□□ -0.14
ATG4B-201ENST00000344376 AQP7P3A6NL99 342 aa14.2□□□□□ -0.14
ATG4B-201ENST00000344376 CCT8L1PA6NM43 557 aa14.2□□□□□ -0.14
ATG4B-201ENST00000344376 VAMP5O95183 116 aa14.2□□□□□ -0.14
ATG4B-201ENST00000344376 IGHV3-9P01782 118 aa14.2□□□□□ -0.14
ATG4B-201ENST00000344376 PNMTP11086 282 aa14.2□□□□□ -0.14
ATG4B-201ENST00000344376 GUCY1A3Q02108 690 aa14.2□□□□□ -0.14
ATG4B-201ENST00000344376 CYLC2Q14093 348 aaPredicted RBP14.2□□□□□ -0.14
ATG4B-201ENST00000344376 PPA1Q15181 289 aa14.2□□□□□ -0.14
ATG4B-201ENST00000344376 TRMT5Q32P41 509 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms