RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 FABP7O15540 132 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 SLC2A10O95528 541 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 GXYLT1Q4G148 440 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 FAM69BQ5VUD6 431 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 ZNF836Q6ZNA1 936 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 ZNF704Q6ZNC4 412 aaPredicted RBP6.66□□□□□ -1.34
VCAN-202ENST00000342785 TMEM99Q8N816 258 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 OR4M2Q8NGB6 313 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 Q96M85 177 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 PSD2Q9BQI7 771 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 ELOVL3Q9HB03 270 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 MEPEQ9NQ76 525 aaPredicted RBP6.66□□□□□ -1.34
VCAN-202ENST00000342785 ZNF701Q9NV72 531 aaPredicted RBP6.66□□□□□ -1.34
VCAN-202ENST00000342785 C2orf42Q9NWW7 574 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 C14orf166Q9Y224 244 aaKnown RBP6.66□□□□□ -1.34
VCAN-202ENST00000342785 PCDHGA3Q9Y5H0 932 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 MEIS3P1A6NDR6 274 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 CHP2O43745 196 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 CTNSO60931 367 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 TACR3P29371 465 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 RBMS1P29558 406 aaKnown RBP6.66□□□□□ -1.34
VCAN-202ENST00000342785 RAE1P78406 368 aaKnown RBP6.66□□□□□ -1.34
VCAN-202ENST00000342785 FAPQ12884 760 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 EFR3AQ14156 821 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 EIF2B1Q14232 305 aaKnown RBP6.66□□□□□ -1.34
VCAN-202ENST00000342785 OR5M10Q6IEU7 315 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 LYPD4Q6UWN0 246 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 KIF18BQ86Y91 864 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 OR13C3Q8NGS6 347 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 SLC37A2Q8TED4 501 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 SENP5Q96HI0 755 aaPredicted RBP6.66□□□□□ -1.34
VCAN-202ENST00000342785 NIPAL2Q9H841 368 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 SYT7O43581 403 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 ADAM23O75077 832 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 TCRBP04435 133 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 CD14P08571 375 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 RAB40ALP0C0E4 278 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 GLP1RP43220 463 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 ASAH1Q13510 395 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 PARM1Q6UWI2 310 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 IQCF2Q8IXL9 164 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 OR13H1Q8NG92 308 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 RAB40AQ8WXH6 277 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 MAP3K3Q99759 626 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 WDR77Q9BQA1 342 aaPredicted RBP6.66□□□□□ -1.34
VCAN-202ENST00000342785 MFFQ9GZY8 342 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 SLC38A1Q9H2H9 487 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 NUP50Q9UKX7 468 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 SHROOM3Q8TF72 1996 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 DPM1O60762 260 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 SCGB1D2O95969 90 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 CEACAM5P06731 702 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 ITGB8P26012 769 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 TGM4P49221 684 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 AIMP2Q13155 320 aaKnown RBP6.66□□□□□ -1.34
VCAN-202ENST00000342785 SLC35D2Q76EJ3 337 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 CCL4L1Q8NHW4 92 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 HHIPQ96QV1 700 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 PDCD1LG2Q9BQ51 273 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 ZNF350Q9GZX5 532 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 METTL17Q9H7H0 456 aaPredicted RBP6.66□□□□□ -1.34
VCAN-202ENST00000342785 FKBP14Q9NWM8 211 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 ABI3Q9P2A4 366 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 FBXO9Q9UK97 447 aaPredicted RBP6.66□□□□□ -1.34
VCAN-202ENST00000342785 CA14Q9ULX7 337 aa6.66□□□□□ -1.34
VCAN-202ENST00000342785 TNFRSF10CO14798 259 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 SFTPBP07988 381 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 CSF1P09603 554 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 AKR1C4P17516 323 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 CD38P28907 300 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 TRHRP34981 398 aaPredicted RBP6.65□□□□□ -1.34
VCAN-202ENST00000342785 TNFRSF4P43489 277 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 HMGA2P52926 109 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 ADPRHP54922 357 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 RAB2AP61019 212 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 CXADRP78310 365 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 CDC20Q12834 499 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 SMAD2Q15796 467 aaKnown RBP6.65□□□□□ -1.34
VCAN-202ENST00000342785 Q499Y3 187 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 APOOLQ6UXV4 268 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 ELP5Q8TE02 316 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 MRGPRX3Q96LB0 322 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 CTRCQ99895 268 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 OR10A5Q9H207 317 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 NRIP3Q9NQ35 241 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 COQ3Q9NZJ6 369 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 NPAP1Q9NZP6 1156 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 TMPRSS11EQ9UL52 423 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 ZNF736B4DX44 427 aaPredicted RBP6.65□□□□□ -1.34
VCAN-202ENST00000342785 PEX14O75381 377 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 MPIG6BO95866 241 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 PLATP00750 562 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 ZNF43P17038 809 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 HTR3AP46098 478 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 EMP2P54851 167 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 DUSP6Q16828 381 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 TCEAL6Q6IPX3 200 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 MFSD4AQ8N468 514 aa6.65□□□□□ -1.34
VCAN-202ENST00000342785 C19orf47Q8N9M1 422 aaKnown RBP6.65□□□□□ -1.34
VCAN-202ENST00000342785 GPR32P1Q8NGA4 272 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms