RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 ITGBL1O95965 494 aaPredicted RBP13.94□□□□□ -0.18
UBE3B-202ENST00000342494 TK1P04183 234 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 MSL3P1P0C860 447 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 MAOAP21397 527 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 F2RL1P55085 397 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 ZNF169Q14929 603 aaPredicted RBP13.94□□□□□ -0.18
UBE3B-202ENST00000342494 ZNF813Q6ZN06 617 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 NDUFAF7Q7L592 441 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 SLC35F3Q8IY50 421 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 ZC3HAV1LQ96H79 300 aaKnown RBP13.94□□□□□ -0.18
UBE3B-202ENST00000342494 PRRT1Q99946 306 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 CMSS1Q9BQ75 279 aaKnown RBP13.94□□□□□ -0.18
UBE3B-202ENST00000342494 UNKLQ9H9P5 680 aaKnown RBP13.94□□□□□ -0.18
UBE3B-202ENST00000342494 ZNF593O00488 134 aaPredicted RBP13.94□□□□□ -0.18
UBE3B-202ENST00000342494 BIDP55957 195 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 MTCP1P56278 107 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 RRAS2P62070 204 aaPredicted RBP13.94□□□□□ -0.18
UBE3B-202ENST00000342494 SEMA3BQ13214 749 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 MEF2DQ14814 521 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 ZNF77Q15935 545 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 LCN10Q6JVE6 187 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 TSSK4Q6SA08 328 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 OR6F1Q8NGZ6 308 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 OR1E3Q8WZA6 343 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 GTF2H4Q92759 462 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 MYH1P12882 1939 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 LYRM1O43325 122 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 MRPS14O60783 128 aaKnown RBP13.94□□□□□ -0.18
UBE3B-202ENST00000342494 TFPTP0C1Z6 253 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 CD79BP40259 229 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 MFAP5Q13361 173 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 OR8B8Q15620 311 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 RPS19BP1Q86WX3 136 aaKnown RBP13.94□□□□□ -0.18
UBE3B-202ENST00000342494 OR7G1Q8NGA0 311 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 CHD2O14647 1828 aaKnown RBP13.94□□□□□ -0.18
UBE3B-202ENST00000342494 CCDC88AQ3V6T2 1871 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 NAP1L6A6NFF2 107 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 H7C1C5 153 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 SLC34A2O95436 690 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 PTGER4P35408 488 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 LGALS4P56470 323 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 LCN6P62502 163 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 MRPS10P82664 201 aaKnown RBP13.94□□□□□ -0.18
UBE3B-202ENST00000342494 IKZF1Q13422 519 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 BCL7AQ4VC05 210 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 TRNP1Q6NT89 227 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 MAFAQ8NHW3 353 aaPredicted RBP13.94□□□□□ -0.18
UBE3B-202ENST00000342494 SSX3Q99909 188 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 TMEM246Q9BRR3 403 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 FOXQ1Q9C009 403 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 C12orf49Q9H741 205 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 BABAM2Q9NXR7 383 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 STEAP1Q9UHE8 339 aa13.94□□□□□ -0.18
UBE3B-202ENST00000342494 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 TNFSF12O43508 249 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 ZNF14P17017 642 aaPredicted RBP13.93□□□□□ -0.18
UBE3B-202ENST00000342494 RTN4RL1Q86UN2 441 aaPredicted RBP13.93□□□□□ -0.18
UBE3B-202ENST00000342494 GTPBP8Q8N3Z3 284 aaPredicted RBP13.93□□□□□ -0.18
UBE3B-202ENST00000342494 ZNF740Q8NDX6 193 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 SNX18Q96RF0 628 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 QRSL1Q9H0R6 528 aaKnown RBP13.93□□□□□ -0.18
UBE3B-202ENST00000342494 ZNF286AQ9HBT8 521 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 CITO14578 2027 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 PRRC2BQ5JSZ5 2229 aaKnown RBP13.93□□□□□ -0.18
UBE3B-202ENST00000342494 SRFP11831 508 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 FCGR2AP12318 317 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 OPRD1P41143 372 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 PPP5CP53041 499 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 RPS18P62269 152 aaKnown RBP13.93□□□□□ -0.18
UBE3B-202ENST00000342494 NKAIN1Q4KMZ8 207 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 FRMPD2BQ6IN97 320 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 UBALD2Q8IYN6 164 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 ADGRG5Q8IZF4 528 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 OR4D6Q8NGJ1 314 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 CXCL16Q9H2A7 254 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 PRAMEF25A6NGN4 478 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 TSPAN31Q12999 210 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 H1FXQ92522 213 aaKnown RBP13.93□□□□□ -0.18
UBE3B-202ENST00000342494 KHSRPQ92945 711 aaKnown RBP eCLIP13.93□□□□□ -0.18
UBE3B-202ENST00000342494 FGF22Q9HCT0 170 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 ASB4Q9Y574 426 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 MYH13Q9UKX3 1938 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 AHDC1Q5TGY3 1603 aaPredicted RBP13.93□□□□□ -0.18
UBE3B-202ENST00000342494 MDFIC2A0A1B0GVS7 189 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 FAM166BA8MTA8 275 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 MCRIP1C9JLW8 97 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 J3KTA2 159 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 SSTR4P31391 388 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 RIPPLY1Q0D2K3 151 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 MSMO1Q15800 293 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 SLC35D2Q76EJ3 337 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 KIF18BQ86Y91 864 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 ZFAND1Q8TCF1 268 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 MBNL1Q9NR56 388 aaKnown RBP13.93□□□□□ -0.18
UBE3B-202ENST00000342494 EMCNQ9ULC0 261 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 PRRG2O14669 202 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 FOXD2O60548 495 aaPredicted RBP13.93□□□□□ -0.18
UBE3B-202ENST00000342494 STK17BO94768 372 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 BDKRB2P30411 391 aa13.93□□□□□ -0.18
UBE3B-202ENST00000342494 S100A7P31151 101 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms