RNA–Protein interactions for RNA: ENST00000341247.8

LIMA1-201, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMA1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-201ENST00000341247 ASCC3Q8N3C0 2202 aaKnown RBP9.47□□□□□ -0.89
LIMA1-201ENST00000341247 TEX13CA0A0J9YWL9 993 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 OR6C68A6NDL8 312 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 EIF4EP06730 217 aaKnown RBP9.47□□□□□ -0.89
LIMA1-201ENST00000341247 CD27P26842 260 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 ITPKBP27987 946 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 EVX1P49640 407 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 COL19A1Q14993 1142 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 ARHGAP11AQ6P4F7 1023 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 GDPD1Q8N9F7 314 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 RTN4RQ9BZR6 473 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 SRA1Q9HD15 236 aaKnown RBP9.47□□□□□ -0.89
LIMA1-201ENST00000341247 CUTCQ9NTM9 273 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 ACOXLQ9NUZ1 547 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 COPS3Q9UNS2 423 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 TP53BP1Q12888 1972 aaPredicted RBP9.47□□□□□ -0.89
LIMA1-201ENST00000341247 SLC2A5P22732 501 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 MYL9P24844 172 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 FASLGP48023 281 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 TDGQ13569 410 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 ODF4Q2M2E3 257 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 ZNF544Q6NX49 715 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 MZT2AQ6P582 158 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 LEG1Q6P5S2 330 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 ZNF615Q8N8J6 731 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 FYTTD1Q96QD9 318 aaKnown RBP9.47□□□□□ -0.89
LIMA1-201ENST00000341247 MESP1Q9BRJ9 268 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 HOXD1Q9GZZ0 328 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 POLE3Q9NRF9 147 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 GPR27Q9NS67 375 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 FBXL21Q9UKT6 434 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 RNF215Q9Y6U7 377 aa9.47□□□□□ -0.89
LIMA1-201ENST00000341247 FAM240BA0A1B0GVZ2 78 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 TMEM221A6NGB7 291 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 METTL12A8MUP2 240 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 B4DXG7 233 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 LANCL1O43813 399 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 IGLV3-19P01714 112 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 SRFP11831 508 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 MRPS15P82914 257 aaKnown RBP9.46□□□□□ -0.89
LIMA1-201ENST00000341247 PON3Q15166 354 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 ZNF141Q15928 474 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 KRT74Q7RTS7 529 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 LSMEM1Q8N8F7 131 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 SETD6Q8TBK2 473 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 PTPMT1Q8WUK0 201 aaPredicted RBP9.46□□□□□ -0.89
LIMA1-201ENST00000341247 ZNF426Q9BUY5 554 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 PPP1R3EQ9H7J1 279 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 CHRNA9Q9UGM1 479 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 AK6Q9Y3D8 172 aaKnown RBP9.46□□□□□ -0.89
LIMA1-201ENST00000341247 FRYQ5TBA9 3013 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 A0A087WUJ7 227 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 IGHV3-20A0A0C4DH32 117 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 ANKRD61A6NGH8 418 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 NPIPB9F8W1W9 429 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 WISP1O95388 367 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 GPANK1O95872 356 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 EDNRAP25101 427 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 FUT7Q11130 342 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 QPRTQ15274 297 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 PLET1Q6UQ28 207 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 SLC35F2Q8IXU6 374 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 IZUMO1Q8IYV9 350 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 OR4M1Q8NGD0 313 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 OR6F1Q8NGZ6 308 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 THAP3Q8WTV1 239 aaPredicted RBP9.46□□□□□ -0.89
LIMA1-201ENST00000341247 OR14A2Q96R54 314 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 CNN2Q99439 309 aaKnown RBP9.46□□□□□ -0.89
LIMA1-201ENST00000341247 RANGRFQ9HD47 186 aaPredicted RBP9.46□□□□□ -0.89
LIMA1-201ENST00000341247 POLHQ9Y253 713 aa9.46□□□□□ -0.89
LIMA1-201ENST00000341247 A0A0B4J293 547 aa9.46□□□□□ -0.9
LIMA1-201ENST00000341247 A0A1W2PR77 199 aa9.46□□□□□ -0.9
LIMA1-201ENST00000341247 TLCD2A6NGC4 264 aa9.46□□□□□ -0.9
LIMA1-201ENST00000341247 TVP23AA6NH52 213 aa9.46□□□□□ -0.9
LIMA1-201ENST00000341247 CPNE3O75131 537 aaKnown RBP9.46□□□□□ -0.9
LIMA1-201ENST00000341247 ZNF217O75362 1048 aa9.46□□□□□ -0.9
LIMA1-201ENST00000341247 SNRPBP14678 240 aaKnown RBP9.46□□□□□ -0.9
LIMA1-201ENST00000341247 BCKDHBP21953 392 aa9.46□□□□□ -0.9
LIMA1-201ENST00000341247 MAP2K3P46734 347 aa9.46□□□□□ -0.9
LIMA1-201ENST00000341247 GABRA4P48169 554 aa9.46□□□□□ -0.9
LIMA1-201ENST00000341247 GPR143P51810 404 aa9.46□□□□□ -0.9
LIMA1-201ENST00000341247 NR0B1P51843 470 aaKnown RBP9.46□□□□□ -0.9
LIMA1-201ENST00000341247 ACSM1Q08AH1 577 aa9.46□□□□□ -0.9
LIMA1-201ENST00000341247 ASAH1Q13510 395 aa9.46□□□□□ -0.9
LIMA1-201ENST00000341247 TOMM34Q15785 309 aaPredicted RBP9.46□□□□□ -0.9
LIMA1-201ENST00000341247 SFXN4Q6P4A7 337 aa9.46□□□□□ -0.9
LIMA1-201ENST00000341247 C16orf47Q6ZP98 133 aaPredicted RBP9.46□□□□□ -0.9
LIMA1-201ENST00000341247 GRAMD2AQ8IUY3 354 aa9.46□□□□□ -0.9
LIMA1-201ENST00000341247 OR4D9Q8NGE8 314 aa9.46□□□□□ -0.9
LIMA1-201ENST00000341247 OR5H6Q8NGV6 325 aa9.46□□□□□ -0.9
LIMA1-201ENST00000341247 PELI1Q96FA3 418 aa9.46□□□□□ -0.9
LIMA1-201ENST00000341247 ZFP3Q96NJ6 502 aa9.46□□□□□ -0.9
LIMA1-201ENST00000341247 SLC25A18Q9H1K4 315 aa9.46□□□□□ -0.9
LIMA1-201ENST00000341247 TP63Q9H3D4 680 aaPredicted RBP9.46□□□□□ -0.9
LIMA1-201ENST00000341247 SLC2A4RGQ9NR83 387 aa9.46□□□□□ -0.9
LIMA1-201ENST00000341247 N6AMT1Q9Y5N5 214 aa9.46□□□□□ -0.9
LIMA1-201ENST00000341247 MN1Q10571 1320 aaPredicted RBP9.46□□□□□ -0.9
LIMA1-201ENST00000341247 TRBV2A0A0J9YWF9 115 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 C11orf98E9PRG8 122 aa9.45□□□□□ -0.9
LIMA1-201ENST00000341247 SCDO00767 359 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms