RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 MRPL33O75394 65 aaKnown RBP9.2□□□□□ -0.94
ATXN3-201ENST00000340660 LINGO3P0C6S8 592 aa9.2□□□□□ -0.94
ATXN3-201ENST00000340660 VSIG10L2P0DP72 767 aa9.2□□□□□ -0.94
ATXN3-201ENST00000340660 CD1DP15813 335 aa9.2□□□□□ -0.94
ATXN3-201ENST00000340660 COMTP21964 271 aa9.2□□□□□ -0.94
ATXN3-201ENST00000340660 MPGP29372 298 aa9.2□□□□□ -0.94
ATXN3-201ENST00000340660 GP5P40197 560 aa9.2□□□□□ -0.94
ATXN3-201ENST00000340660 ZNF41P51814 821 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-201ENST00000340660 BPIFB3P59826 476 aa9.2□□□□□ -0.94
ATXN3-201ENST00000340660 TSPO2Q5TGU0 170 aa9.2□□□□□ -0.94
ATXN3-201ENST00000340660 GPR157Q5UAW9 335 aa9.2□□□□□ -0.94
ATXN3-201ENST00000340660 GAS2L3Q86XJ1 694 aa9.2□□□□□ -0.94
ATXN3-201ENST00000340660 SLC35G2Q8TBE7 412 aa9.2□□□□□ -0.94
ATXN3-201ENST00000340660 DPF1Q92782 380 aa9.2□□□□□ -0.94
ATXN3-201ENST00000340660 MRRFQ96E11 262 aaKnown RBP9.2□□□□□ -0.94
ATXN3-201ENST00000340660 TBL1XR1Q9BZK7 514 aa9.2□□□□□ -0.94
ATXN3-201ENST00000340660 MEGF9Q9H1U4 602 aa9.2□□□□□ -0.94
ATXN3-201ENST00000340660 OR5V1Q9UGF6 321 aa9.2□□□□□ -0.94
ATXN3-201ENST00000340660 H0YHG0 523 aa9.19□□□□□ -0.94
ATXN3-201ENST00000340660 FOXE1O00358 373 aaPredicted RBP9.19□□□□□ -0.94
ATXN3-201ENST00000340660 ZNF195O14628 629 aa9.19□□□□□ -0.94
ATXN3-201ENST00000340660 PSTPIP1O43586 416 aa9.19□□□□□ -0.94
ATXN3-201ENST00000340660 NPHS1O60500 1241 aa9.19□□□□□ -0.94
ATXN3-201ENST00000340660 KCNH1O95259 989 aa9.19□□□□□ -0.94
ATXN3-201ENST00000340660 ENO2P09104 434 aaPredicted RBP9.19□□□□□ -0.94
ATXN3-201ENST00000340660 NR4A1P22736 598 aa9.19□□□□□ -0.94
ATXN3-201ENST00000340660 CLK3P49761 638 aaKnown RBP9.19□□□□□ -0.94
ATXN3-201ENST00000340660 RAP1GDS1P52306 607 aa9.19□□□□□ -0.94
ATXN3-201ENST00000340660 PGGT1BP53609 377 aa9.19□□□□□ -0.94
ATXN3-201ENST00000340660 PSPHP78330 225 aa9.19□□□□□ -0.94
ATXN3-201ENST00000340660 SARNPP82979 210 aaKnown RBP9.19□□□□□ -0.94
ATXN3-201ENST00000340660 PDK3Q15120 406 aa9.19□□□□□ -0.94
ATXN3-201ENST00000340660 C11orf88Q6PI97 169 aa9.19□□□□□ -0.94
ATXN3-201ENST00000340660 LRRN1Q6UXK5 716 aa9.19□□□□□ -0.94
ATXN3-201ENST00000340660 KATNAL2Q8IYT4 538 aa9.19□□□□□ -0.94
ATXN3-201ENST00000340660 RPP25LQ8N5L8 163 aaKnown RBP9.19□□□□□ -0.94
ATXN3-201ENST00000340660 BVESQ8NE79 360 aa9.19□□□□□ -0.94
ATXN3-201ENST00000340660 CEP70Q8NHQ1 597 aa9.19□□□□□ -0.94
ATXN3-201ENST00000340660 ACTRT2Q8TDY3 377 aa9.19□□□□□ -0.94
ATXN3-201ENST00000340660 CTNNBL1Q8WYA6 563 aaPredicted RBP9.19□□□□□ -0.94
ATXN3-201ENST00000340660 RGMAQ96B86 450 aa9.19□□□□□ -0.94
ATXN3-201ENST00000340660 WDR34Q96EX3 536 aa9.19□□□□□ -0.94
ATXN3-201ENST00000340660 PTCD3Q96EY7 689 aaKnown RBP9.19□□□□□ -0.94
ATXN3-201ENST00000340660 DNAJC7Q99615 494 aa9.19□□□□□ -0.94
ATXN3-201ENST00000340660 UPB1Q9UBR1 384 aa9.19□□□□□ -0.94
ATXN3-201ENST00000340660 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.19□□□□□ -0.94
ATXN3-201ENST00000340660 IL20RAQ9UHF4 553 aa9.19□□□□□ -0.94
ATXN3-201ENST00000340660 VPREB3Q9UKI3 123 aa9.19□□□□□ -0.94
ATXN3-201ENST00000340660 OR10H1Q9Y4A9 318 aa9.19□□□□□ -0.94
ATXN3-201ENST00000340660 ATP6V1DQ9Y5K8 247 aa9.19□□□□□ -0.94
ATXN3-201ENST00000340660 C17orf100A8MU93 164 aa9.18□□□□□ -0.94
ATXN3-201ENST00000340660 SPOPO43791 374 aa9.18□□□□□ -0.94
ATXN3-201ENST00000340660 ERAL1O75616 437 aaKnown RBP9.18□□□□□ -0.94
ATXN3-201ENST00000340660 BSGP35613 385 aa9.18□□□□□ -0.94
ATXN3-201ENST00000340660 SLC1A1P43005 524 aa9.18□□□□□ -0.94
ATXN3-201ENST00000340660 GPX6P59796 221 aa9.18□□□□□ -0.94
ATXN3-201ENST00000340660 PLP2Q04941 152 aa9.18□□□□□ -0.94
ATXN3-201ENST00000340660 SLC18A2Q05940 514 aa9.18□□□□□ -0.94
ATXN3-201ENST00000340660 IQCB1Q15051 598 aa9.18□□□□□ -0.94
ATXN3-201ENST00000340660 CASP12Q6UXS9 341 aa9.18□□□□□ -0.94
ATXN3-201ENST00000340660 PPP1R35Q8TAP8 253 aa9.18□□□□□ -0.94
ATXN3-201ENST00000340660 WDR20Q8TBZ3 569 aa9.18□□□□□ -0.94
ATXN3-201ENST00000340660 LRTOMTQ8WZ04 291 aa9.18□□□□□ -0.94
ATXN3-201ENST00000340660 CMTM7Q96FZ5 175 aa9.18□□□□□ -0.94
ATXN3-201ENST00000340660 GBP4Q96PP9 640 aa9.18□□□□□ -0.94
ATXN3-201ENST00000340660 KIFC1Q9BW19 673 aa9.18□□□□□ -0.94
ATXN3-201ENST00000340660 PATZ1Q9HBE1 687 aaKnown RBP9.18□□□□□ -0.94
ATXN3-201ENST00000340660 INPP5EQ9NRR6 644 aa9.18□□□□□ -0.94
ATXN3-201ENST00000340660 COMMD10Q9Y6G5 202 aa9.18□□□□□ -0.94
ATXN3-201ENST00000340660 ARPC4-TTLL3A0A0A6YYG9 625 aa9.17□□□□□ -0.94
ATXN3-201ENST00000340660 IGHV2-70DA0A0C4DH43 119 aa9.17□□□□□ -0.94
ATXN3-201ENST00000340660 UTS2O95399 124 aa9.17□□□□□ -0.94
ATXN3-201ENST00000340660 HSP90AA1P07900 732 aaKnown RBP9.17□□□□□ -0.94
ATXN3-201ENST00000340660 PCNAP12004 261 aa9.17□□□□□ -0.94
ATXN3-201ENST00000340660 SLC7A1P30825 629 aa9.17□□□□□ -0.94
ATXN3-201ENST00000340660 PSG6Q00889 435 aa9.17□□□□□ -0.94
ATXN3-201ENST00000340660 GLIPR1L2Q4G1C9 344 aa9.17□□□□□ -0.94
ATXN3-201ENST00000340660 FAM180BQ6P0A1 224 aa9.17□□□□□ -0.94
ATXN3-201ENST00000340660 CYP20A1Q6UW02 462 aa9.17□□□□□ -0.94
ATXN3-201ENST00000340660 BTNL3Q6UXE8 466 aa9.17□□□□□ -0.94
ATXN3-201ENST00000340660 GATSQ8NAP1 163 aa9.17□□□□□ -0.94
ATXN3-201ENST00000340660 OR1K1Q8NGR3 316 aa9.17□□□□□ -0.94
ATXN3-201ENST00000340660 SH3YL1Q96HL8 342 aaPredicted RBP9.17□□□□□ -0.94
ATXN3-201ENST00000340660 EFCAB11Q9BUY7 163 aa9.17□□□□□ -0.94
ATXN3-201ENST00000340660 DPAGT1Q9H3H5 408 aa9.17□□□□□ -0.94
ATXN3-201ENST00000340660 DDX31Q9H8H2 851 aaKnown RBP9.17□□□□□ -0.94
ATXN3-201ENST00000340660 A0A0U1RQK1 487 aa9.16□□□□□ -0.94
ATXN3-201ENST00000340660 A0A1W2PPW3 197 aa9.16□□□□□ -0.94
ATXN3-201ENST00000340660 F5H0A9 414 aaPredicted RBP9.16□□□□□ -0.94
ATXN3-201ENST00000340660 HAUS5O94927 633 aa9.16□□□□□ -0.94
ATXN3-201ENST00000340660 H6PDO95479 791 aa9.16□□□□□ -0.94
ATXN3-201ENST00000340660 LY6G6CO95867 125 aa9.16□□□□□ -0.94
ATXN3-201ENST00000340660 THRBP10828 461 aa9.16□□□□□ -0.94
ATXN3-201ENST00000340660 MAKP20794 623 aa9.16□□□□□ -0.94
ATXN3-201ENST00000340660 EIF1P41567 113 aaKnown RBP9.16□□□□□ -0.94
ATXN3-201ENST00000340660 SLC1A2P43004 574 aa9.16□□□□□ -0.94
ATXN3-201ENST00000340660 ASMTP46597 345 aa9.16□□□□□ -0.94
ATXN3-201ENST00000340660 VPS41P49754 854 aa9.16□□□□□ -0.94
ATXN3-201ENST00000340660 VEGFCP49767 419 aa9.16□□□□□ -0.94
ATXN3-201ENST00000340660 CDKN2DP55273 166 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms