RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 FAM46AQ96IP4 442 aaKnown RBP6.51□□□□□ -1.37
NUP43-201ENST00000340413 SF3B5Q9BWJ5 86 aaKnown RBP6.51□□□□□ -1.37
NUP43-201ENST00000340413 MCCC2Q9HCC0 563 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 KCNG2Q9UJ96 466 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 RASD1Q9Y272 281 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 ENO4A6NNW6 628 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 FRS3O43559 492 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 NME2P1O60361 137 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 TMEM127O75204 238 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 SMNDC1O75940 238 aaKnown RBP eCLIP6.5□□□□□ -1.37
NUP43-201ENST00000340413 GKN3PP0CG01 181 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 ZNF3P17036 446 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 MAKP20794 623 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 NME2P22392 152 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 MST1P26927 711 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 ACVR2AP27037 513 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 OTX2P32243 289 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 GPR50Q13585 617 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 CTU2Q2VPK5 515 aaKnown RBP6.5□□□□□ -1.37
NUP43-201ENST00000340413 PDSS1Q5T2R2 415 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 C1orf140Q5VVS0 124 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 ISLR2Q6UXK2 745 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 ADGRG3Q86Y34 549 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 CCDC71Q8IV32 467 aaPredicted RBP6.5□□□□□ -1.37
NUP43-201ENST00000340413 OR4K17Q8NGC6 315 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 FAM81AQ8TBF8 368 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 DOK1Q99704 481 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 UTP23Q9BRU9 249 aaKnown RBP6.5□□□□□ -1.37
NUP43-201ENST00000340413 ALG12Q9BV10 488 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 PTDSS2Q9BVG9 487 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 NMNAT2Q9BZQ4 307 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 UBQLN3Q9H347 655 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 PROK2Q9HC23 129 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 WASF3Q9UPY6 502 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 MSRB2Q9Y3D2 182 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 IGHV3-20A0A0C4DH32 117 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 TMEM129A0AVI4 362 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 OR2W5A6NFC9 320 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 RIIAD1A6NNX1 92 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 PHYHO14832 338 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 SUSD5O60279 629 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 GLSO94925 669 aaPredicted RBP6.5□□□□□ -1.37
NUP43-201ENST00000340413 IGHA1P01876 353 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 HIST1H2ABP04908 130 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 CD14P08571 375 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 SLC35A1P78382 337 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 CDC20Q12834 499 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 SYT6Q5T7P8 510 aaPredicted RBP6.5□□□□□ -1.37
NUP43-201ENST00000340413 B3GNTL1Q67FW5 361 aaPredicted RBP6.5□□□□□ -1.37
NUP43-201ENST00000340413 HIST3H2AQ7L7L0 130 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 PRSS58Q8IYP2 241 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 ZNF786Q8N393 782 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 PSD4Q8NDX1 1056 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 TM9SF4Q92544 642 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 HIST1H2ACQ93077 130 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 GTPBP3Q969Y2 492 aaKnown RBP6.5□□□□□ -1.37
NUP43-201ENST00000340413 DDOQ99489 341 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 TSSK6Q9BXA6 273 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 AKIRIN1Q9H9L7 192 aaPredicted RBP6.5□□□□□ -1.37
NUP43-201ENST00000340413 ACKR4Q9NPB9 350 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 VSX1Q9NZR4 365 aaPredicted RBP6.5□□□□□ -1.37
NUP43-201ENST00000340413 KLHL13Q9P2N7 655 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 RHCGQ9UBD6 479 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 UNC13CQ8NB66 2214 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 TMEM72A0PK05 275 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 WWP2O00308 870 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 MAN1A2O60476 641 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 SEC14L2O76054 403 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 GNAO1P09471 354 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 SLC2A5P22732 501 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 SDHAP31040 664 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 YAP1P46937 504 aaKnown RBP6.5□□□□□ -1.37
NUP43-201ENST00000340413 DAP3P51398 398 aaKnown RBP6.5□□□□□ -1.37
NUP43-201ENST00000340413 RAC1P63000 192 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 CSNK2A1P68400 391 aaPredicted RBP6.5□□□□□ -1.37
NUP43-201ENST00000340413 CLN3Q13286 438 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 ATP1A4Q13733 1029 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 COL9A2Q14055 689 aaPredicted RBP6.5□□□□□ -1.37
NUP43-201ENST00000340413 ZIK1Q3SY52 487 aaPredicted RBP6.5□□□□□ -1.37
NUP43-201ENST00000340413 FAM69BQ5VUD6 431 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 TUBA3EQ6PEY2 450 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 GDPGP1Q6ZNW5 385 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 OAFQ86UD1 273 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 TMCO5AQ8N6Q1 288 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 OR1J4Q8NGS1 313 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 C8orf44Q96CB5 159 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 NAA11Q9BSU3 229 aaPredicted RBP6.5□□□□□ -1.37
NUP43-201ENST00000340413 NOX1Q9Y5S8 564 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 KIAA1549Q9HCM3 1950 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 OIP5O43482 229 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 GFRA3O60609 400 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 FAM20BO75063 409 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 ADAM11O75078 769 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 FUT1P19526 365 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 DCKP27707 260 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 TMBIM6P55061 237 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 EGR4Q05215 589 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 AGAP7PQ5VUJ5 663 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 OLIG3Q7RTU3 272 aa6.5□□□□□ -1.37
NUP43-201ENST00000340413 GALNT5Q7Z7M9 940 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms