RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 ANKRD34BA5PLL1 514 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 A8MU76 341 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 BTN3A3O00478 584 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 SOCS6O14544 535 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 OGG1O15527 345 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 FRS3O43559 492 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 GSTZ1O43708 216 aaPredicted RBP9.91□□□□□ -0.82
RTN3-201ENST00000338850 GPRIN2O60269 458 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 SNAPC5O75971 98 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 UBL3O95164 117 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 GPR75O95800 540 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 IFI30P13284 250 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 ATP6V1E1P36543 226 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 INPP1P49441 399 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 EPHA4P54764 986 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 NRG3P56975 720 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 POU6F2P78424 691 aaPredicted RBP9.91□□□□□ -0.82
RTN3-201ENST00000338850 PITPNAQ00169 270 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 MGAT2Q10469 447 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 MAP4K2Q12851 820 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 MRPL28Q13084 256 aaKnown RBP9.91□□□□□ -0.82
RTN3-201ENST00000338850 RUNX2Q13950 521 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 P2RY14Q15391 338 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 CLPPQ16740 277 aaPredicted RBP9.91□□□□□ -0.82
RTN3-201ENST00000338850 PRICKLE4Q2TBC4 344 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 DEFB133Q30KQ1 61 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 CCDC58Q4VC31 144 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 SLC35D3Q5M8T2 416 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 SFXN4Q6P4A7 337 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 LINC00114Q6XXX2 140 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 LRRC69Q6ZNQ3 347 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 RTL4Q6ZR62 310 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 VASH1Q7L8A9 365 aaPredicted RBP9.91□□□□□ -0.82
RTN3-201ENST00000338850 ZNF438Q7Z4V0 828 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 COX18Q8N8Q8 333 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 KCT2Q8NC54 265 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 BBS1Q8NFJ9 593 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 OR51G2Q8NGK0 314 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 OR5W2Q8NH69 310 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 IFI44Q8TCB0 444 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 LMX1AQ8TE12 382 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 DEDD2Q8WXF8 326 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 AKAP1Q92667 903 aaKnown RBP eCLIP9.91□□□□□ -0.82
RTN3-201ENST00000338850 UPRTQ96BW1 309 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 PGLYRP3Q96LB9 341 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 HYLS1Q96M11 299 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 ZNF578Q96N58 590 aaPredicted RBP9.91□□□□□ -0.82
RTN3-201ENST00000338850 ZFYVE21Q9BQ24 234 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 TMEM246Q9BRR3 403 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 TMED9Q9BVK6 235 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 TCEAL2Q9H3H9 227 aaPredicted RBP9.91□□□□□ -0.82
RTN3-201ENST00000338850 TMEM27Q9HBJ8 222 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 ADGRL4Q9HBW9 690 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 RANGRFQ9HD47 186 aaPredicted RBP9.91□□□□□ -0.82
RTN3-201ENST00000338850 CTPS2Q9NRF8 586 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 EVA1BQ9NVM1 165 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 MAT2BQ9NZL9 334 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 ZNF624Q9P2J8 865 aaPredicted RBP9.91□□□□□ -0.82
RTN3-201ENST00000338850 EXTL2Q9UBQ6 330 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 NUFIP1Q9UHK0 495 aaKnown RBP9.91□□□□□ -0.82
RTN3-201ENST00000338850 ICAM5Q9UMF0 924 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 TDRD6O60522 2096 aaKnown RBP9.91□□□□□ -0.82
RTN3-201ENST00000338850 A0A1W2PS29 197 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 OR5K4A6NMS3 321 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 HSPB2A8KAH6 182 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 INMT-MINDY4F8WBC2 141 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 CYR61O00622 381 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 TFECO14948 347 aaPredicted RBP9.9□□□□□ -0.82
RTN3-201ENST00000338850 RRP8O43159 456 aaKnown RBP9.9□□□□□ -0.82
RTN3-201ENST00000338850 LRRTM2O43300 516 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 ARL6IP5O75915 188 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 UGT2B7P16662 529 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 ELK1P19419 428 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 MAKP20794 623 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 MNDAP41218 407 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 PITPNBP48739 271 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 MMP15P51511 669 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 RAB38P57729 211 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 GNG2P59768 71 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 SKP1P63208 163 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 IGLV3-21P80748 117 aaPredicted RBP9.9□□□□□ -0.82
RTN3-201ENST00000338850 HOXC5Q00444 222 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 DYRK1AQ13627 763 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 ZNF141Q15928 474 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 HSPB2Q16082 182 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 C1QTNF12Q5T7M4 302 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 FCRL6Q6DN72 434 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 PLBD1Q6P4A8 553 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 GUSBP11Q6P575 273 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 FIGLAQ6QHK4 219 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 WDR88Q6ZMY6 472 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 SHFQ7M4L6 423 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 OVCH1Q7RTY7 1134 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 ZNF550Q7Z398 422 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 NUP54Q7Z3B4 507 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 SLITRK4Q8IW52 837 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 SLC37A3Q8NCC5 494 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 NLGN4YQ8NFZ3 816 aaPredicted RBP9.9□□□□□ -0.82
RTN3-201ENST00000338850 HGDQ93099 445 aa9.9□□□□□ -0.82
RTN3-201ENST00000338850 MARVELD3Q96A59 401 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms