RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 HTR1FP30939 366 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 HOXC13P31276 330 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 SLC9A3R2Q15599 337 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 DEFB134Q4QY38 66 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 ALKAL1Q6UXT8 129 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 CMTM4Q8IZR5 234 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 OR11H4Q8NGC9 324 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 NEK7Q8TDX7 302 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 MYEOVQ96EZ4 313 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 SPACA7Q96KW9 195 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 P2RY12Q9H244 342 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 UBQLN3Q9H347 655 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 TMEM38AQ9H6F2 299 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 DEC1Q9P2X7 70 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 TBC1D3DA0A087WVF3 549 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 TBC1D3IA0A087WXS9 549 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 TBC1D3EA0A087X179 549 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 TBC1D3KA0A087X1G2 549 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 ZNF840PA6NDX5 716 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 TBC1D3FA6NER0 549 aaPredicted RBP12.32□□□□□ -0.44
COL2A1-201ENST00000337299 TBC1D3LB9A6J9 549 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 LY86O95711 162 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 TBC1D3HP0C7X1 549 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 CD70P32970 193 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 PFN3P60673 137 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 DSC1Q08554 894 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 IRF5Q13568 498 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 EBPQ15125 230 aaKnown RBP12.32□□□□□ -0.44
COL2A1-201ENST00000337299 ALG10BQ5I7T1 473 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 MANEALQ5VSG8 457 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 TBC1D3GQ6DHY5 549 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 TBC1D3CQ6IPX1 549 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 CORO6Q6QEF8 472 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 TBC1D3Q8IZP1 549 aaPredicted RBP12.32□□□□□ -0.44
COL2A1-201ENST00000337299 OR5AR1Q8NGP9 310 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 ORAI3Q9BRQ5 295 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 MED18Q9BUE0 208 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 MAFFQ9ULX9 164 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 DHDHQ9UQ10 334 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 RBM7Q9Y580 266 aaKnown RBP12.32□□□□□ -0.44
COL2A1-201ENST00000337299 TSPAN11A1L157 253 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 SYT5O00445 386 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 LATO43561 262 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 HYAL3O43820 417 aaPredicted RBP12.32□□□□□ -0.44
COL2A1-201ENST00000337299 ZDHHC11BP0C7U3 371 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 ZNF28P17035 718 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 KIAA0141Q14154 515 aaPredicted RBP12.32□□□□□ -0.44
COL2A1-201ENST00000337299 AADACL4Q5VUY2 407 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 ZNF687Q8N1G0 1237 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 OR51D1Q8NGF3 324 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 ZFP57Q9NU63 452 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 GRHPRQ9UBQ7 328 aa12.32□□□□□ -0.44
COL2A1-201ENST00000337299 ATXN7L1Q9ULK2 861 aaPredicted RBP12.32□□□□□ -0.44
COL2A1-201ENST00000337299 FAM74A7A6NL05 159 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 GAPDHSO14556 408 aaPredicted RBP12.31□□□□□ -0.44
COL2A1-201ENST00000337299 CASC3O15234 703 aaKnown RBP12.31□□□□□ -0.44
COL2A1-201ENST00000337299 DOK2O60496 412 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 BDKRB2P30411 391 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 NRG3P56975 720 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 GSG1Q2KHT4 349 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 GGTA1PQ4G0N0 100 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 FAM74A3Q4VXF1 159 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 Q6ZTK2 550 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 P4HA3Q7Z4N8 544 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 PNLDC1Q8NA58 520 aaKnown RBP12.31□□□□□ -0.44
COL2A1-201ENST00000337299 SLAMF9Q96A28 289 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 HCAR1Q9BXC0 346 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 PARPBPQ9NWS1 579 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 COL22A1Q8NFW1 1626 aaPredicted RBP12.31□□□□□ -0.44
COL2A1-201ENST00000337299 SIGLEC6O43699 453 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 B3GALT2O43825 422 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 AHSA1O95433 338 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 LGI1O95970 557 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 IMPA1P29218 277 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 HLA-FP30511 346 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 SIRPAP78324 504 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 PDGFRLQ15198 375 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 ZNF750Q32MQ0 723 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 OR2L8Q8NGY9 312 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 SETD7Q8WTS6 366 aaKnown RBP12.31□□□□□ -0.44
COL2A1-201ENST00000337299 NXF2Q9GZY0 626 aaKnown RBP12.31□□□□□ -0.44
COL2A1-201ENST00000337299 GPR160Q9UJ42 338 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 NPFFR2Q9Y5X5 522 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 BORCS7-ASMTA0A0B4J1R7 106 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 KHNYNO15037 678 aaKnown RBP12.31□□□□□ -0.44
COL2A1-201ENST00000337299 LIMS3P0CW19 117 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 LIMS4P0CW20 117 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 MAKP20794 623 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 PSMB5P28074 263 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 TEAD1P28347 426 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 CTSOP43234 321 aaPredicted RBP12.31□□□□□ -0.44
COL2A1-201ENST00000337299 RAB5CP51148 216 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 EPHA4P54764 986 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 ARF3P61204 181 aaPredicted RBP12.31□□□□□ -0.44
COL2A1-201ENST00000337299 MRPS10P82664 201 aaKnown RBP12.31□□□□□ -0.44
COL2A1-201ENST00000337299 ARF1P84077 181 aaKnown RBP12.31□□□□□ -0.44
COL2A1-201ENST00000337299 PGAP1Q75T13 922 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 PRSS58Q8IYP2 241 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 KDM8Q8N371 416 aa12.31□□□□□ -0.44
COL2A1-201ENST00000337299 OR2AK2Q8NG84 335 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms