RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 DOCK3Q8IZD9 2030 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 TSPAN11A1L157 253 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 CSO75390 466 aaKnown RBP13.89□□□□□ -0.19
C9orf47-201ENST00000334490 CRTAPO75718 401 aaPredicted RBP13.89□□□□□ -0.19
C9orf47-201ENST00000334490 TEAD1P28347 426 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 BMXP51813 675 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 BIDP55957 195 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 RNASE10Q5GAN6 216 aaKnown RBP13.89□□□□□ -0.19
C9orf47-201ENST00000334490 HBMQ6B0K9 141 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 SDF2Q99470 211 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 GABRG3Q99928 467 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 ABCG5Q9H222 651 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 FBXL3Q9UKT7 428 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 RBMX2Q9Y388 322 aaKnown RBP13.89□□□□□ -0.19
C9orf47-201ENST00000334490 SHROOM3Q8TF72 1996 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 GPR171O14626 319 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 ITGAMP11215 1152 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 RAB3AP20336 220 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 DHRS13Q6UX07 377 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 GDF7Q7Z4P5 450 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 OR7G2Q8NG99 324 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 ABHD5Q8WTS1 349 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 TMEM255BQ8WV15 326 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 KIAA1217Q5T5P2 1943 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 UGT2B10P36537 528 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 HTR5AP47898 357 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 ZNF91Q05481 1191 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 ACSM3Q53FZ2 586 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 UGT2A3Q6UWM9 527 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 ZNF845Q96IR2 970 aaPredicted RBP13.88□□□□□ -0.19
C9orf47-201ENST00000334490 DYNLRB1Q9NP97 96 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 NGBQ9NPG2 151 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 KLHL9Q9P2J3 617 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 EBF1Q9UH73 591 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 EIF4E2O60573 245 aaKnown RBP13.88□□□□□ -0.19
C9orf47-201ENST00000334490 TNFSF4P23510 183 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 C21orf33P30042 268 aaPredicted RBP13.88□□□□□ -0.19
C9orf47-201ENST00000334490 BSGP35613 385 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 SLC26A5P58743 744 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 BAIAP2L2Q6UXY1 529 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 ZNF836Q6ZNA1 936 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 PPP1R35Q8TAP8 253 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 NRG4Q8WWG1 115 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 MED20Q9H944 212 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 OR6C70A6NIJ9 312 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 ETHE1O95571 254 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 STT3AP46977 705 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 FOXC1Q12948 553 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 ARL6IP1Q15041 203 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 GUSBP11Q6P575 273 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 B3GLCTQ6Y288 498 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 C3P1Q6ZMU1 363 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 SLC35A4Q96G79 324 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 HIF3AQ9Y2N7 669 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 PCDHGA10Q9Y5H3 936 aa13.88□□□□□ -0.19
C9orf47-201ENST00000334490 ALPLP05186 524 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 ZGLP1P0C6A0 271 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 STOMP27105 288 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 MAN2A2P49641 1150 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 DUSP7Q16829 419 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 ZNF385BQ569K4 471 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 SLC35D2Q76EJ3 337 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 OR5D14Q8NGL3 314 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 MENTQ9BUN1 341 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 SLC25A18Q9H1K4 315 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 CNOT2Q9NZN8 540 aaKnown RBP13.87□□□□□ -0.19
C9orf47-201ENST00000334490 COPZ2Q9P299 210 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 GPR160Q9UJ42 338 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 CCDC187A0A096LP49 1063 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 PPICP45877 212 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 RUNX2Q13950 521 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 SMN1Q16637 294 aaKnown RBP13.87□□□□□ -0.19
C9orf47-201ENST00000334490 GRINAQ7Z429 371 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 OR51T1Q8NGJ9 327 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 BABAM2Q9NXR7 383 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 KANTRA0A1W2PQU2 76 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 K7EQS6 105 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 CDK1P06493 297 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 NID1P14543 1247 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 PSMA6P60900 246 aaKnown RBP13.87□□□□□ -0.19
C9orf47-201ENST00000334490 PYHIN1Q6K0P9 492 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 DLEU7Q6UYE1 221 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 GDPGP1Q6ZNW5 385 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 NMNAT3Q96T66 252 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 ALG12Q9BV10 488 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 MRPL15Q9P015 296 aaKnown RBP13.87□□□□□ -0.19
C9orf47-201ENST00000334490 ZNF175Q9Y473 711 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 RFPL3O75679 317 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 PTHP01270 115 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 ELAVL4P26378 380 aaKnown RBP13.87□□□□□ -0.19
C9orf47-201ENST00000334490 SRSF5Q13243 272 aaKnown RBP13.87□□□□□ -0.19
C9orf47-201ENST00000334490 FAM69AQ5T7M9 428 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 C1orf140Q5VVS0 124 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 YRDCQ86U90 279 aaKnown RBP13.87□□□□□ -0.19
C9orf47-201ENST00000334490 GALNT11Q8NCW6 608 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 FNDC8Q8TC99 324 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 AKAP1Q92667 903 aaKnown RBP eCLIP13.87□□□□□ -0.19
C9orf47-201ENST00000334490 SMOC1Q9H4F8 434 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 B3GNT3Q9Y2A9 372 aa13.87□□□□□ -0.19
C9orf47-201ENST00000334490 AHCTF1Q8WYP5 2266 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms