RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 REEP5Q00765 189 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 MELKQ14680 651 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 ZNF169Q14929 603 aaPredicted RBP12.68□□□□□ -0.38
SYNE3-201ENST00000334258 RFLNBQ8N5W9 214 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 MRPL43Q8N983 215 aaKnown RBP12.68□□□□□ -0.38
SYNE3-201ENST00000334258 RELL2Q8NC24 303 aaPredicted RBP12.68□□□□□ -0.38
SYNE3-201ENST00000334258 FAM98AQ8NCA5 519 aaKnown RBP12.68□□□□□ -0.38
SYNE3-201ENST00000334258 OR5M1Q8NGP8 315 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 TNFAIP8L1Q8WVP5 186 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 KISS1RQ969F8 398 aaPredicted RBP12.68□□□□□ -0.38
SYNE3-201ENST00000334258 PEX11GQ96HA9 241 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 ZNF514Q96K75 400 aaPredicted RBP12.68□□□□□ -0.38
SYNE3-201ENST00000334258 LRRC3BQ96PB8 259 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 PELOQ9BRX2 385 aaKnown RBP12.68□□□□□ -0.38
SYNE3-201ENST00000334258 ING1Q9UK53 422 aaPredicted RBP12.68□□□□□ -0.38
SYNE3-201ENST00000334258 ZNF780BQ9Y6R6 833 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 ANAPC1Q9H1A4 1944 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 TRAV1-2A0A0B4J238 106 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 LRIT2A6NDA9 550 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 NAP1L6A6NFF2 107 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 ACOD1A6NK06 481 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 F8W036 122 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 PPP1R3DO95685 299 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 UCHL1P09936 223 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 PPP3CBP16298 524 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 ZNF3P17036 446 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 RAB3AP20336 220 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 PPM1AP35813 382 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 GMFBP60983 142 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 ETFDHQ16134 617 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 RANBP3LQ86VV4 465 aaPredicted RBP12.68□□□□□ -0.38
SYNE3-201ENST00000334258 ACOT4Q8N9L9 421 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 SPPL3Q8TCT6 385 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 TMEM239Q8WW34 195 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 S100A16Q96FQ6 103 aaKnown RBP12.68□□□□□ -0.38
SYNE3-201ENST00000334258 OR52A5Q9H2C5 316 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 ADGRL4Q9HBW9 690 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 TM7SF3Q9NS93 570 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 WSB2Q9NYS7 404 aaPredicted RBP12.68□□□□□ -0.38
SYNE3-201ENST00000334258 ADAM29Q9UKF5 820 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 ZNF443Q9Y2A4 671 aaPredicted RBP12.68□□□□□ -0.38
SYNE3-201ENST00000334258 LINC01553A4QN01 128 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 D6RAR5 112 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 GABARAPH6UMI1 98 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 BHLHE40O14503 412 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 AIFM1O95831 613 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 CBX7O95931 251 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 ASGR2P07307 311 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 LAMP2P13473 410 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 NDUFAF6Q330K2 333 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 SPICQ8N5J4 248 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 CDS1Q92903 461 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 SLC35A4Q96G79 324 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 SEMA4CQ9C0C4 833 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 NOX4Q9NPH5 578 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 CMC2Q9NRP2 79 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 TAS2R5Q9NYW4 299 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 SLC35A3Q9Y2D2 325 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 PCDHGA5Q9Y5G8 931 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 PCYT1BQ9Y5K3 369 aaPredicted RBP12.67□□□□□ -0.38
SYNE3-201ENST00000334258 SULT1B1O43704 296 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 WDPCPO95876 746 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 GABRA1P14867 456 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 MAGEB1P43366 347 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 DLX5P56178 289 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 CSNK1G2P78368 415 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 KRT33BQ14525 404 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.67□□□□□ -0.38
SYNE3-201ENST00000334258 NRSN1Q8IZ57 195 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 LNX2Q8N448 690 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 SFXN5Q8TD22 340 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 IRF7Q92985 503 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 SLC6A20Q9NP91 592 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 HPF1Q9NWY4 346 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 USP36Q9P275 1121 aaKnown RBP12.67□□□□□ -0.38
SYNE3-201ENST00000334258 SLC23A2Q9UGH3 650 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 PRELID3BQ9Y3B1 194 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 DMDP11532 3685 aa12.67□□□□□ -0.38
SYNE3-201ENST00000334258 TRAPPC13A5PLN9 417 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 ZNF879B4DU55 563 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 PSMD9O00233 223 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 SC5DO75845 299 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 RPN2P04844 631 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 FGF2P09038 288 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 ZNF35P13682 527 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 NT5EP21589 574 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 HIST1H1TP22492 207 aaPredicted RBP12.66□□□□□ -0.38
SYNE3-201ENST00000334258 CERS1P27544 350 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 FXYD6P3P58550 94 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 FGL2Q14314 439 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 ZNF658BQ4V348 819 aaPredicted RBP12.66□□□□□ -0.38
SYNE3-201ENST00000334258 ELP2Q6IA86 826 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 LILRA6Q6PI73 481 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 ZDHHC1Q8WTX9 485 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 THEM6Q8WUY1 208 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 OTUB2Q96DC9 234 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 BPIFA2Q96DR5 249 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 SLC38A3Q99624 504 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 ACTRT3Q9BYD9 372 aa12.66□□□□□ -0.38
SYNE3-201ENST00000334258 PCBD2Q9H0N5 130 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms