RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 SLC17A1Q14916 467 aa11.96□□□□□ -0.49
GTF3C6-201ENST00000329970 STK11Q15831 433 aa11.96□□□□□ -0.49
GTF3C6-201ENST00000329970 PGGHGQ32M88 737 aa11.96□□□□□ -0.49
GTF3C6-201ENST00000329970 NXNQ6DKJ4 435 aa11.96□□□□□ -0.49
GTF3C6-201ENST00000329970 ZNF836Q6ZNA1 936 aa11.96□□□□□ -0.49
GTF3C6-201ENST00000329970 HMGN2P46Q86SG4 172 aa11.96□□□□□ -0.49
GTF3C6-201ENST00000329970 ATG4DQ86TL0 474 aaPredicted RBP11.96□□□□□ -0.49
GTF3C6-201ENST00000329970 CCDC103Q8IW40 242 aa11.96□□□□□ -0.49
GTF3C6-201ENST00000329970 C1orf162Q8NEQ5 155 aaPredicted RBP11.96□□□□□ -0.49
GTF3C6-201ENST00000329970 OR52P1PQ8NH57 321 aa11.96□□□□□ -0.49
GTF3C6-201ENST00000329970 PNPT1Q8TCS8 783 aaKnown RBP11.96□□□□□ -0.49
GTF3C6-201ENST00000329970 SLC38A5Q8WUX1 472 aa11.96□□□□□ -0.49
GTF3C6-201ENST00000329970 GTPBP3Q969Y2 492 aaKnown RBP11.96□□□□□ -0.49
GTF3C6-201ENST00000329970 C7orf26Q96N11 449 aa11.96□□□□□ -0.49
GTF3C6-201ENST00000329970 TRAF4Q9BUZ4 470 aaPredicted RBP11.96□□□□□ -0.49
GTF3C6-201ENST00000329970 ARMC7Q9H6L4 198 aa11.96□□□□□ -0.49
GTF3C6-201ENST00000329970 BCL2L10Q9HD36 194 aa11.96□□□□□ -0.49
GTF3C6-201ENST00000329970 FAIMQ9NVQ4 179 aa11.96□□□□□ -0.49
GTF3C6-201ENST00000329970 NPAP1Q9NZP6 1156 aa11.96□□□□□ -0.49
GTF3C6-201ENST00000329970 MAGED1Q9Y5V3 778 aaPredicted RBP11.96□□□□□ -0.49
GTF3C6-201ENST00000329970 SLC25A15Q9Y619 301 aa11.96□□□□□ -0.49
GTF3C6-201ENST00000329970 CHD3Q12873 2000 aaKnown RBP11.96□□□□□ -0.5
GTF3C6-201ENST00000329970 YLPM1P49750 1951 aaKnown RBP11.96□□□□□ -0.5
GTF3C6-201ENST00000329970 FAM234BA2RU67 622 aa11.95□□□□□ -0.5
GTF3C6-201ENST00000329970 FZD7O75084 574 aa11.95□□□□□ -0.5
GTF3C6-201ENST00000329970 RAD51DO75771 328 aa11.95□□□□□ -0.5
GTF3C6-201ENST00000329970 TGDSO95455 350 aa11.95□□□□□ -0.5
GTF3C6-201ENST00000329970 BCHEP06276 602 aa11.95□□□□□ -0.5
GTF3C6-201ENST00000329970 GPIP06744 558 aa11.95□□□□□ -0.5
GTF3C6-201ENST00000329970 ITGA5P08648 1049 aa11.95□□□□□ -0.5
GTF3C6-201ENST00000329970 ETFAP13804 333 aa11.95□□□□□ -0.5
GTF3C6-201ENST00000329970 HOXB9P17482 250 aaPredicted RBP11.95□□□□□ -0.5
GTF3C6-201ENST00000329970 CRATP43155 626 aa11.95□□□□□ -0.5
GTF3C6-201ENST00000329970 FADDQ13158 208 aa11.95□□□□□ -0.5
GTF3C6-201ENST00000329970 LARS2Q15031 903 aaKnown RBP11.95□□□□□ -0.5
GTF3C6-201ENST00000329970 GABRA6Q16445 453 aa11.95□□□□□ -0.5
GTF3C6-201ENST00000329970 WBP2NLQ6ICG8 309 aa11.95□□□□□ -0.5
GTF3C6-201ENST00000329970 ALKBH2Q6NS38 261 aa11.95□□□□□ -0.5
GTF3C6-201ENST00000329970 EPGNQ6UW88 154 aa11.95□□□□□ -0.5
GTF3C6-201ENST00000329970 TMEM108Q6UXF1 575 aa11.95□□□□□ -0.5
GTF3C6-201ENST00000329970 DNM1P46Q6ZS02 220 aa11.95□□□□□ -0.5
GTF3C6-201ENST00000329970 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.95□□□□□ -0.5
GTF3C6-201ENST00000329970 UBE2J2Q8N2K1 259 aa11.95□□□□□ -0.5
GTF3C6-201ENST00000329970 MIER2Q8N344 545 aa11.95□□□□□ -0.5
GTF3C6-201ENST00000329970 GTF2H4Q92759 462 aa11.95□□□□□ -0.5
GTF3C6-201ENST00000329970 NEUROG1Q92886 237 aa11.95□□□□□ -0.5
GTF3C6-201ENST00000329970 OR52B2Q96RD2 323 aa11.95□□□□□ -0.5
GTF3C6-201ENST00000329970 RAD21L1Q9H4I0 556 aa11.95□□□□□ -0.5
GTF3C6-201ENST00000329970 CISD1Q9NZ45 108 aaKnown RBP11.95□□□□□ -0.5
GTF3C6-201ENST00000329970 ZNF443Q9Y2A4 671 aaPredicted RBP11.95□□□□□ -0.5
GTF3C6-201ENST00000329970 IFT52Q9Y366 437 aa11.95□□□□□ -0.5
GTF3C6-201ENST00000329970 GMEB1Q9Y692 573 aa11.95□□□□□ -0.5
GTF3C6-201ENST00000329970 ARFGEF3Q5TH69 2177 aa11.95□□□□□ -0.5
GTF3C6-201ENST00000329970 ALPK2Q86TB3 2170 aa11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 CIB4A0PJX0 185 aa11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 ZC3H12DA2A288 527 aaKnown RBP11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 TMEM247A6NEH6 219 aa11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 LIPT2A6NK58 231 aa11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 AQP7P3A6NL99 342 aa11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 ABCD4O14678 606 aa11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 NPIPB7O75200 414 aa11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 CD8AP01732 235 aa11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 PAX7P23759 505 aa11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 CXCR1P25024 350 aa11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 IDUAP35475 653 aa11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 COPZ1P61923 177 aa11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 IRX1P78414 480 aaPredicted RBP11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 RGNQ15493 299 aa11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 CLEC12BQ2HXU8 276 aa11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 AGBL2Q5U5Z8 902 aa11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 KLHL17Q6TDP4 642 aa11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 CASP12Q6UXS9 341 aa11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 Q71RC1 249 aaPredicted RBP11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 VRK2Q86Y07 508 aa11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 OR9I1Q8NGQ6 314 aa11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 TMEM19Q96HH6 336 aa11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 SPATA9Q9BWV2 254 aa11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 PAIP1Q9H074 479 aaKnown RBP11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 ALG2Q9H553 416 aa11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 BARX1Q9HBU1 254 aaPredicted RBP11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 A4GALTQ9NPC4 353 aa11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 RLIMQ9NVW2 624 aa11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 TMEM45AQ9NWC5 275 aa11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 ZNF232Q9UNY5 417 aa11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 AMDHD2Q9Y303 409 aa11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 CHST2Q9Y4C5 530 aa11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 PCDHB14Q9Y5E9 798 aa11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 USH1CQ9Y6N9 552 aa11.94□□□□□ -0.5
GTF3C6-201ENST00000329970 CCT8L1PA6NM43 557 aa11.93□□□□□ -0.5
GTF3C6-201ENST00000329970 A8MVM7 634 aa11.93□□□□□ -0.5
GTF3C6-201ENST00000329970 TMEM229AB2RXF0 380 aa11.93□□□□□ -0.5
GTF3C6-201ENST00000329970 SMAD7O15105 426 aaKnown RBP11.93□□□□□ -0.5
GTF3C6-201ENST00000329970 VAMP5O95183 116 aa11.93□□□□□ -0.5
GTF3C6-201ENST00000329970 IGHV3-9P01782 118 aa11.93□□□□□ -0.5
GTF3C6-201ENST00000329970 GKN3PP0CG01 181 aa11.93□□□□□ -0.5
GTF3C6-201ENST00000329970 CCNA2P20248 432 aa11.93□□□□□ -0.5
GTF3C6-201ENST00000329970 CD40P25942 277 aa11.93□□□□□ -0.5
GTF3C6-201ENST00000329970 P2RY4P51582 365 aa11.93□□□□□ -0.5
GTF3C6-201ENST00000329970 CDH11P55287 796 aa11.93□□□□□ -0.5
GTF3C6-201ENST00000329970 TGFBR3Q03167 851 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms