RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 TMEM69Q5SWH9 247 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 GARNL3Q5VVW2 1013 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 ELOA3Q8NG57 546 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 ZNF563Q8TA94 476 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 RIT1Q92963 219 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 PELI1Q96FA3 418 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 SEC22CQ9BRL7 303 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 FLRT3Q9NZU0 649 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 NUBP2Q9Y5Y2 271 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 ZNF879B4DU55 563 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 HRKO00198 91 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 TFP02787 698 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 ADRB1P08588 477 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 GRK6P43250 576 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 AP2S1P53680 142 aaPredicted RBP11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 HEPHL1Q6MZM0 1159 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 KIRREL2Q6UWL6 708 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 CREB3L2Q70SY1 520 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 RNF113BQ8IZP6 322 aaKnown RBP11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 ZNF676Q8N7Q3 588 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 OR6N2Q8NGY6 317 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 THEM6Q8WUY1 208 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 RANBP3Q9H6Z4 567 aaPredicted RBP11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 MGAT4CQ9UBM8 478 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 KLK11Q9UBX7 282 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 KIAA1671Q9BY89 1806 aa11.87□□□□□ -0.51
HMGCS1-201ENST00000325110 TMEM72A0PK05 275 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 C4orf47A7E2U8 309 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 UBL3O95164 117 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 THBS1P07996 1170 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 IL9P15248 144 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 TSFMP43897 325 aaKnown RBP11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 KIR2DS3Q14952 304 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 TIGD3Q6B0B8 471 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 USP53Q70EK8 1073 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 KCTD12Q96CX2 325 aaKnown RBP11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 Q96M85 177 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 TRIM2Q9C040 744 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 TCEAL2Q9H3H9 227 aaPredicted RBP11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 ERVK-19Q9WJR5 959 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 ANXA2P2A6NMY6 339 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 C11orf98E9PRG8 122 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 KHNYNO15037 678 aaKnown RBP11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 PRICKLE3O43900 615 aaPredicted RBP11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 ANXA2P07355 339 aaKnown RBP11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 EPXP11678 715 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 LCN1P31025 176 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 DGAT2L6Q6ZPD8 337 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 TPRA1Q86W33 373 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 ZNF687Q8N1G0 1237 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 OR52I2Q8NH67 350 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 YIPF5Q969M3 257 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 ZC3HAV1LQ96H79 300 aaKnown RBP11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 KCNJ15Q99712 375 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 ZNF649Q9BS31 505 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 SEMA4CQ9C0C4 833 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 Q9N2J8 555 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 LRIT1Q9P2V4 623 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 CHURC1-FNTBB4DL54 471 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 KLF4O43474 513 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 PLPP2O43688 288 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 ALDOBP05062 364 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 CTSBP07858 339 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 MAOBP27338 520 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 AQP2P41181 271 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 SNTA1Q13424 505 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 TRAM1Q15629 374 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 LAMTOR1Q6IAA8 161 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 APOOLQ6UXV4 268 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 CMTM4Q8IZR5 234 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 AVL9Q8NBF6 648 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 OR8S1Q8NH09 359 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 KISS1RQ969F8 398 aaPredicted RBP11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 DDOQ99489 341 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 DUSP22Q9NRW4 184 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 GDE1Q9NZC3 331 aa11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 ING1Q9UK53 422 aaPredicted RBP11.86□□□□□ -0.51
HMGCS1-201ENST00000325110 A0A1B0GTH9 108 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 POM121CA8CG34 1229 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 C2orf74A8MZ97 194 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 M0R233 179 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 PLGP00747 810 aaPredicted RBP11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 HSF2Q03933 536 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 FAM53BQ14153 422 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 ST3GAL2Q16842 350 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 PLA1AQ53H76 456 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 PRR22Q8IZ63 422 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 C9orf62Q8N4C0 152 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 ZNF680Q8NEM1 530 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 OR11H4Q8NGC9 324 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 TSEN15Q8WW01 171 aaKnown RBP11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 SLC25A36Q96CQ1 311 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 MRPL48Q96GC5 212 aaKnown RBP11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 MAP6Q96JE9 813 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 MYADMQ96S97 322 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 CFHR5Q9BXR6 569 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 C14orf105Q9NVL8 296 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 RDH8Q9NYR8 311 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 RWDD3Q9Y3V2 267 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 VCANP13611 3396 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms