RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 OR5K3A6NET4 321 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 SOX30O94993 753 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 GIFP27352 417 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 RBMS1P29558 406 aaKnown RBP15.98■□□□□ 0.15
COL9A1-201ENST00000320755 CCR6P51684 374 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 MAZP56270 477 aaKnown RBP15.98■□□□□ 0.15
COL9A1-201ENST00000320755 UBE2IP63279 158 aaKnown RBP15.98■□□□□ 0.15
COL9A1-201ENST00000320755 SIRPAP78324 504 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 MAB21L1Q13394 359 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 NANOGNBQ7Z5D8 188 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 SLC35F2Q8IXU6 374 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 TOMM5Q8N4H5 51 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 BEST4Q8NFU0 473 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 GPBAR1Q8TDU6 330 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 GCDHQ92947 438 aaPredicted RBP15.98■□□□□ 0.15
COL9A1-201ENST00000320755 UBL7Q96S82 380 aaPredicted RBP15.98■□□□□ 0.15
COL9A1-201ENST00000320755 NKIRAS2Q9NYR9 191 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 COPS3Q9UNS2 423 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 RPP14O95059 124 aaKnown RBP15.98■□□□□ 0.15
COL9A1-201ENST00000320755 THEGLP0DJG4 465 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 ACTC1P68032 377 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 ACTA1P68133 377 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 PXKQ7Z7A4 578 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 TPRA1Q86W33 373 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 MS4A15Q8N5U1 240 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 CREB3L1Q96BA8 519 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 MED28Q9H204 178 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 SLA2Q9H6Q3 261 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 CHRNA9Q9UGM1 479 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 A0A087WV48 116 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 OR6C68A6NDL8 312 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 ACOD1A6NK06 481 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 FLRT2O43155 660 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 OR2B3O76000 313 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 MAOBP27338 520 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 HTR2BP41595 481 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 YPEL5P62699 121 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 EIF2B5Q13144 721 aaKnown RBP15.98■□□□□ 0.15
COL9A1-201ENST00000320755 ZFAND1Q8TCF1 268 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 KCTD12Q96CX2 325 aaKnown RBP15.98■□□□□ 0.15
COL9A1-201ENST00000320755 MRPL38Q96DV4 380 aaKnown RBP15.98■□□□□ 0.15
COL9A1-201ENST00000320755 VSTM2LQ96N03 204 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 DERL3Q96Q80 235 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 Q9N2J8 555 aa15.98■□□□□ 0.15
COL9A1-201ENST00000320755 ANKRD61A6NGH8 418 aa15.97■□□□□ 0.15
COL9A1-201ENST00000320755 CLDN12P56749 244 aa15.97■□□□□ 0.15
COL9A1-201ENST00000320755 GALK2Q01415 458 aa15.97■□□□□ 0.15
COL9A1-201ENST00000320755 PLA1AQ53H76 456 aa15.97■□□□□ 0.15
COL9A1-201ENST00000320755 HES5Q5TA89 166 aa15.97■□□□□ 0.15
COL9A1-201ENST00000320755 SIAH3Q8IW03 269 aa15.97■□□□□ 0.15
COL9A1-201ENST00000320755 SERPINA12Q8IW75 414 aa15.97■□□□□ 0.15
COL9A1-201ENST00000320755 ZNF511Q8NB15 262 aa15.97■□□□□ 0.15
COL9A1-201ENST00000320755 C16orf52Q8NHV5 167 aa15.97■□□□□ 0.15
COL9A1-201ENST00000320755 RLN3Q8WXF3 142 aa15.97■□□□□ 0.15
COL9A1-201ENST00000320755 DGAT2Q96PD7 388 aa15.97■□□□□ 0.15
COL9A1-201ENST00000320755 CITED4Q96RK1 184 aa15.97■□□□□ 0.15
COL9A1-201ENST00000320755 PRTFDC1Q9NRG1 225 aa15.97■□□□□ 0.15
COL9A1-201ENST00000320755 BAIAP2Q9UQB8 552 aa15.97■□□□□ 0.15
COL9A1-201ENST00000320755 A8MUA0 341 aa15.97■□□□□ 0.15
COL9A1-201ENST00000320755 FABP7O15540 132 aa15.97■□□□□ 0.15
COL9A1-201ENST00000320755 EPXP11678 715 aa15.97■□□□□ 0.15
COL9A1-201ENST00000320755 RNH1P13489 461 aaKnown RBP15.97■□□□□ 0.15
COL9A1-201ENST00000320755 TRAM1Q15629 374 aa15.97■□□□□ 0.15
COL9A1-201ENST00000320755 THOC7Q6I9Y2 204 aaKnown RBP15.97■□□□□ 0.15
COL9A1-201ENST00000320755 PYHIN1Q6K0P9 492 aa15.97■□□□□ 0.15
COL9A1-201ENST00000320755 LYPD8Q6UX82 237 aa15.97■□□□□ 0.15
COL9A1-201ENST00000320755 MOSPD2Q8NHP6 518 aa15.97■□□□□ 0.15
COL9A1-201ENST00000320755 HSD17B8Q92506 261 aa15.97■□□□□ 0.15
COL9A1-201ENST00000320755 SNAPC3Q92966 411 aa15.97■□□□□ 0.15
COL9A1-201ENST00000320755 MMABQ96EY8 250 aaPredicted RBP15.97■□□□□ 0.15
COL9A1-201ENST00000320755 MAP3K3Q99759 626 aa15.97■□□□□ 0.15
COL9A1-201ENST00000320755 ZNF426Q9BUY5 554 aa15.97■□□□□ 0.15
COL9A1-201ENST00000320755 CD207Q9UJ71 328 aa15.97■□□□□ 0.15
COL9A1-201ENST00000320755 C1QBP02746 253 aa15.96■□□□□ 0.15
COL9A1-201ENST00000320755 MT-ND4P03905 459 aa15.96■□□□□ 0.15
COL9A1-201ENST00000320755 CDK5R1Q15078 307 aa15.96■□□□□ 0.15
COL9A1-201ENST00000320755 BICRALQ6AI39 1079 aa15.96■□□□□ 0.15
COL9A1-201ENST00000320755 FAM160A2Q8N612 972 aaPredicted RBP15.96■□□□□ 0.15
COL9A1-201ENST00000320755 ZDHHC1Q8WTX9 485 aa15.96■□□□□ 0.15
COL9A1-201ENST00000320755 TOE1Q96GM8 510 aaKnown RBP15.96■□□□□ 0.15
COL9A1-201ENST00000320755 SC5DO75845 299 aa15.96■□□□□ 0.15
COL9A1-201ENST00000320755 DHFRP00374 187 aa15.96■□□□□ 0.15
COL9A1-201ENST00000320755 IGHV4-34P06331 123 aa15.96■□□□□ 0.15
COL9A1-201ENST00000320755 CT45A8P0DMV1 189 aa15.96■□□□□ 0.15
COL9A1-201ENST00000320755 CT45A9P0DMV2 189 aa15.96■□□□□ 0.15
COL9A1-201ENST00000320755 HTR4Q13639 388 aa15.96■□□□□ 0.15
COL9A1-201ENST00000320755 SLC36A2Q495M3 483 aa15.96■□□□□ 0.15
COL9A1-201ENST00000320755 CT45A2Q5DJT8 189 aa15.96■□□□□ 0.15
COL9A1-201ENST00000320755 POMZP3Q6PJE2 187 aa15.96■□□□□ 0.15
COL9A1-201ENST00000320755 ZNF550Q7Z398 422 aa15.96■□□□□ 0.15
COL9A1-201ENST00000320755 SMIM19Q96E16 107 aa15.96■□□□□ 0.15
COL9A1-201ENST00000320755 CACNG6Q9BXT2 260 aa15.96■□□□□ 0.15
COL9A1-201ENST00000320755 S1PR5Q9H228 398 aa15.96■□□□□ 0.15
COL9A1-201ENST00000320755 SEMA6CQ9H3T2 930 aa15.96■□□□□ 0.15
COL9A1-201ENST00000320755 PRDM9Q9NQV7 894 aa15.96■□□□□ 0.15
COL9A1-201ENST00000320755 HAO2Q9NYQ3 351 aa15.96■□□□□ 0.15
COL9A1-201ENST00000320755 NCDNQ9UBB6 729 aa15.96■□□□□ 0.15
COL9A1-201ENST00000320755 NOTOA8MTQ0 251 aa15.96■□□□□ 0.14
COL9A1-201ENST00000320755 CENPBD1B2RD01 187 aa15.96■□□□□ 0.14
COL9A1-201ENST00000320755 ZNF780AO75290 641 aaPredicted RBP15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms