RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 ACTR10Q9NZ32 417 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 LHX6Q9UPM6 363 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 PLCL2Q9UPR0 1127 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 ZNF443Q9Y2A4 671 aaPredicted RBP8.9□□□□□ -0.98
PTPRA-202ENST00000318266 HEATR5BQ9P2D3 2071 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 A0A0A6YYD5 115 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 ABHD14A-ACY1A0A1B0GW23 586 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 F5H5P2 479 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 SYT5O00445 386 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 PCDH8O95206 1070 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 WDPCPO95876 746 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 ASGR2P07307 311 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 F3P13726 295 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 SRMP19623 302 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 MST1P26927 711 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 PTH2RP49190 550 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 DLX5P56178 289 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 ID2Q02363 134 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 TRAM1Q15629 374 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 PCGF3Q3KNV8 242 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 GXYLT1Q4G148 440 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 ZNF658BQ4V348 819 aaPredicted RBP8.9□□□□□ -0.98
PTPRA-202ENST00000318266 C4orf46Q504U0 113 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 ZNF805Q5CZA5 627 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 TPGS2Q68CL5 300 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 DEFB128Q7Z7B8 93 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 MUC20Q8N307 709 aaPredicted RBP8.9□□□□□ -0.98
PTPRA-202ENST00000318266 ACOT4Q8N9L9 421 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 PXT1Q8NFP0 134 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 OR52E2Q8NGJ4 325 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 MAFAQ8NHW3 353 aaPredicted RBP8.9□□□□□ -0.98
PTPRA-202ENST00000318266 HERVK_113Q902F9 699 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 DVL3Q92997 716 aaPredicted RBP8.9□□□□□ -0.98
PTPRA-202ENST00000318266 LMLNQ96KR4 655 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 GFI1Q99684 422 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 SLC46A2Q9BY10 475 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 CACYBPQ9HB71 228 aaKnown RBP8.9□□□□□ -0.98
PTPRA-202ENST00000318266 NRIP3Q9NQ35 241 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 CMC2Q9NRP2 79 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 SLC39A1Q9NY26 324 aa8.9□□□□□ -0.98
PTPRA-202ENST00000318266 LRIT2A6NDA9 550 aa8.9□□□□□ -0.99
PTPRA-202ENST00000318266 IFITM5A6NNB3 132 aa8.9□□□□□ -0.99
PTPRA-202ENST00000318266 PIN1P1O15428 100 aa8.9□□□□□ -0.99
PTPRA-202ENST00000318266 ATG12O94817 140 aa8.9□□□□□ -0.99
PTPRA-202ENST00000318266 OR2A4O95047 310 aa8.9□□□□□ -0.99
PTPRA-202ENST00000318266 ECDO95905 644 aaPredicted RBP8.9□□□□□ -0.99
PTPRA-202ENST00000318266 CSNK2A2P19784 350 aaPredicted RBP8.9□□□□□ -0.99
PTPRA-202ENST00000318266 HTR2AP28223 471 aa8.9□□□□□ -0.99
PTPRA-202ENST00000318266 STARP49675 285 aa8.9□□□□□ -0.99
PTPRA-202ENST00000318266 ART1P52961 327 aa8.9□□□□□ -0.99
PTPRA-202ENST00000318266 RPS11P62280 158 aaKnown RBP eCLIP8.9□□□□□ -0.99
PTPRA-202ENST00000318266 SIRPAP78324 504 aa8.9□□□□□ -0.99
PTPRA-202ENST00000318266 MAT1AQ00266 395 aaKnown RBP8.9□□□□□ -0.99
PTPRA-202ENST00000318266 FLI1Q01543 452 aaPredicted RBP8.9□□□□□ -0.99
PTPRA-202ENST00000318266 DHODHQ02127 395 aa8.9□□□□□ -0.99
PTPRA-202ENST00000318266 CDK5R1Q15078 307 aa8.9□□□□□ -0.99
PTPRA-202ENST00000318266 DPPA4Q7L190 304 aa8.9□□□□□ -0.99
PTPRA-202ENST00000318266 CBLN2Q8IUK8 224 aa8.9□□□□□ -0.99
PTPRA-202ENST00000318266 DCUN1D3Q8IWE4 304 aa8.9□□□□□ -0.99
PTPRA-202ENST00000318266 ZFP82Q8N141 532 aa8.9□□□□□ -0.99
PTPRA-202ENST00000318266 LNX2Q8N448 690 aa8.9□□□□□ -0.99
PTPRA-202ENST00000318266 TMEM185AQ8NFB2 350 aa8.9□□□□□ -0.99
PTPRA-202ENST00000318266 OR56A1Q8NGH5 318 aa8.9□□□□□ -0.99
PTPRA-202ENST00000318266 OR6K6Q8NGW6 343 aa8.9□□□□□ -0.99
PTPRA-202ENST00000318266 DUSP19Q8WTR2 217 aa8.9□□□□□ -0.99
PTPRA-202ENST00000318266 BPIFA2Q96DR5 249 aa8.9□□□□□ -0.99
PTPRA-202ENST00000318266 SMIM19Q96E16 107 aa8.9□□□□□ -0.99
PTPRA-202ENST00000318266 S100A16Q96FQ6 103 aaKnown RBP8.9□□□□□ -0.99
PTPRA-202ENST00000318266 OR2A7Q96R45 310 aa8.9□□□□□ -0.99
PTPRA-202ENST00000318266 JAM3Q9BX67 310 aa8.9□□□□□ -0.99
PTPRA-202ENST00000318266 CHST6Q9GZX3 395 aa8.9□□□□□ -0.99
PTPRA-202ENST00000318266 ANKRD10Q9NXR5 420 aa8.9□□□□□ -0.99
PTPRA-202ENST00000318266 EMC3Q9P0I2 261 aa8.9□□□□□ -0.99
PTPRA-202ENST00000318266 AKAP7Q9P0M2 348 aaPredicted RBP8.9□□□□□ -0.99
PTPRA-202ENST00000318266 ZNF230Q9UIE0 474 aaPredicted RBP8.9□□□□□ -0.99
PTPRA-202ENST00000318266 TRAV1-2A0A0B4J238 106 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.89□□□□□ -0.99
PTPRA-202ENST00000318266 EMC8O43402 210 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 TBX19O60806 448 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 OLFM2O95897 454 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 GLAP06280 429 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 CPN1P15169 458 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 ZNF3P17036 446 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 SYN1P17600 705 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 CSNK1G2P78368 415 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 GUCA2AQ02747 115 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 SERTAD2Q14140 314 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 KCNAB1Q14722 419 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 NDUFAF6Q330K2 333 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 LY6G5CQ5SRR4 150 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 FRRS1Q6ZNA5 592 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 PNPLA2Q96AD5 504 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 NUS1Q96E22 293 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 DTD2Q96FN9 168 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 LCORQ96JN0 433 aaPredicted RBP8.89□□□□□ -0.99
PTPRA-202ENST00000318266 ZNF75AQ96N20 296 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 TNFRSF13CQ96RJ3 184 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 PRSS27Q9BQR3 290 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 OR52A5Q9H2C5 316 aa8.89□□□□□ -0.99
PTPRA-202ENST00000318266 TMEM185BQ9H7F4 350 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms