RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 HOXB2P14652 356 aa13.73□□□□□ -0.21
TFE3-201ENST00000315869 ATF4P18848 351 aaPredicted RBP13.73□□□□□ -0.21
TFE3-201ENST00000315869 ARHGAP11BQ3KRB8 267 aa13.73□□□□□ -0.21
TFE3-201ENST00000315869 SLC36A2Q495M3 483 aa13.73□□□□□ -0.21
TFE3-201ENST00000315869 ZNF542PQ5EBM4 170 aa13.73□□□□□ -0.21
TFE3-201ENST00000315869 NMNAT3Q96T66 252 aa13.73□□□□□ -0.21
TFE3-201ENST00000315869 HCN3Q9P1Z3 774 aa13.73□□□□□ -0.21
TFE3-201ENST00000315869 KLK11Q9UBX7 282 aa13.73□□□□□ -0.21
TFE3-201ENST00000315869 UBQLN2Q9UHD9 624 aa13.73□□□□□ -0.21
TFE3-201ENST00000315869 MRPS2Q9Y399 296 aaKnown RBP13.73□□□□□ -0.21
TFE3-201ENST00000315869 OR6C74A6NCV1 312 aa13.72□□□□□ -0.21
TFE3-201ENST00000315869 POM121BA6NF01 834 aa13.72□□□□□ -0.21
TFE3-201ENST00000315869 BLOC1S5-TXNDC5H3BN57 136 aa13.72□□□□□ -0.21
TFE3-201ENST00000315869 KLF4O43474 513 aa13.72□□□□□ -0.21
TFE3-201ENST00000315869 FGF17O60258 216 aa13.72□□□□□ -0.21
TFE3-201ENST00000315869 FMO6PO60774 539 aa13.72□□□□□ -0.21
TFE3-201ENST00000315869 OR7A10O76100 309 aa13.72□□□□□ -0.21
TFE3-201ENST00000315869 SERPINA3P01011 423 aa13.72□□□□□ -0.21
TFE3-201ENST00000315869 IL9P15248 144 aa13.72□□□□□ -0.21
TFE3-201ENST00000315869 HIST1H1CP16403 213 aaKnown RBP13.72□□□□□ -0.21
TFE3-201ENST00000315869 ENPP1P22413 925 aa13.72□□□□□ -0.21
TFE3-201ENST00000315869 DUSP8Q13202 625 aa13.72□□□□□ -0.21
TFE3-201ENST00000315869 DEFB110Q30KQ9 67 aa13.72□□□□□ -0.21
TFE3-201ENST00000315869 CD276Q5ZPR3 534 aa13.72□□□□□ -0.21
TFE3-201ENST00000315869 CMTM4Q8IZR5 234 aa13.72□□□□□ -0.21
TFE3-201ENST00000315869 DEFB119Q8N690 84 aa13.72□□□□□ -0.21
TFE3-201ENST00000315869 KCNE5Q9UJ90 142 aa13.72□□□□□ -0.21
TFE3-201ENST00000315869 IKZF2Q9UKS7 526 aa13.72□□□□□ -0.21
TFE3-201ENST00000315869 CHURC1-FNTBB4DL54 471 aa13.72□□□□□ -0.21
TFE3-201ENST00000315869 SELENOFO60613 162 aa13.72□□□□□ -0.21
TFE3-201ENST00000315869 CENPAP49450 140 aa13.72□□□□□ -0.21
TFE3-201ENST00000315869 SIRPAP78324 504 aa13.72□□□□□ -0.21
TFE3-201ENST00000315869 BDH1Q02338 343 aa13.72□□□□□ -0.21
TFE3-201ENST00000315869 PARGQ86W56 976 aa13.72□□□□□ -0.21
TFE3-201ENST00000315869 OR52I2Q8NH67 350 aa13.72□□□□□ -0.21
TFE3-201ENST00000315869 KISS1RQ969F8 398 aaPredicted RBP13.72□□□□□ -0.21
TFE3-201ENST00000315869 ELMOD3Q96FG2 381 aa13.72□□□□□ -0.21
TFE3-201ENST00000315869 APOOQ9BUR5 198 aa13.72□□□□□ -0.21
TFE3-201ENST00000315869 POT1Q9NUX5 634 aa13.72□□□□□ -0.21
TFE3-201ENST00000315869 URADA6NGE7 173 aa13.71□□□□□ -0.21
TFE3-201ENST00000315869 SMAD9O15198 467 aaKnown RBP13.71□□□□□ -0.21
TFE3-201ENST00000315869 CTSVO60911 334 aa13.71□□□□□ -0.21
TFE3-201ENST00000315869 TFP02787 698 aa13.71□□□□□ -0.21
TFE3-201ENST00000315869 RPS15AP62244 130 aaKnown RBP13.71□□□□□ -0.21
TFE3-201ENST00000315869 EEF1A1P68104 462 aaKnown RBP13.71□□□□□ -0.21
TFE3-201ENST00000315869 RIN1Q13671 783 aa13.71□□□□□ -0.21
TFE3-201ENST00000315869 TRAM1Q15629 374 aa13.71□□□□□ -0.21
TFE3-201ENST00000315869 LGALSLQ3ZCW2 172 aaPredicted RBP13.71□□□□□ -0.21
TFE3-201ENST00000315869 APOOLQ6UXV4 268 aa13.71□□□□□ -0.21
TFE3-201ENST00000315869 SLITRK4Q8IW52 837 aa13.71□□□□□ -0.21
TFE3-201ENST00000315869 SAMD14Q8IZD0 417 aaPredicted RBP13.71□□□□□ -0.21
TFE3-201ENST00000315869 TOR1AIP2Q8NFQ8 470 aa13.71□□□□□ -0.21
TFE3-201ENST00000315869 CNN2Q99439 309 aaKnown RBP13.71□□□□□ -0.21
TFE3-201ENST00000315869 TIMP4Q99727 224 aa13.71□□□□□ -0.21
TFE3-201ENST00000315869 GINS4Q9BRT9 223 aa13.71□□□□□ -0.21
TFE3-201ENST00000315869 C20orf85Q9H1P6 137 aa13.71□□□□□ -0.21
TFE3-201ENST00000315869 ZNF346Q9UL40 294 aaKnown RBP13.71□□□□□ -0.21
TFE3-201ENST00000315869 ATG2AQ2TAZ0 1938 aa13.71□□□□□ -0.21
TFE3-201ENST00000315869 RNGTTO60942 597 aaKnown RBP13.71□□□□□ -0.21
TFE3-201ENST00000315869 ZNF10P21506 573 aaPredicted RBP13.71□□□□□ -0.21
TFE3-201ENST00000315869 PRKACBP22694 351 aa13.71□□□□□ -0.21
TFE3-201ENST00000315869 SELENOPP49908 381 aa13.71□□□□□ -0.21
TFE3-201ENST00000315869 GSG1Q2KHT4 349 aa13.71□□□□□ -0.21
TFE3-201ENST00000315869 OTPQ5XKR4 325 aa13.71□□□□□ -0.21
TFE3-201ENST00000315869 POMZP3Q6PJE2 187 aa13.71□□□□□ -0.21
TFE3-201ENST00000315869 FIGLAQ6QHK4 219 aa13.71□□□□□ -0.21
TFE3-201ENST00000315869 SLC35F2Q8IXU6 374 aa13.71□□□□□ -0.21
TFE3-201ENST00000315869 PELI1Q96FA3 418 aa13.71□□□□□ -0.21
TFE3-201ENST00000315869 OR2M4Q96R27 311 aa13.71□□□□□ -0.21
TFE3-201ENST00000315869 UBL7Q96S82 380 aaPredicted RBP13.71□□□□□ -0.21
TFE3-201ENST00000315869 TIMM29Q9BSF4 260 aa13.71□□□□□ -0.21
TFE3-201ENST00000315869 DZANK1Q9NVP4 752 aa13.71□□□□□ -0.21
TFE3-201ENST00000315869 DAPP1Q9UN19 280 aa13.71□□□□□ -0.21
TFE3-201ENST00000315869 OR10H1Q9Y4A9 318 aa13.71□□□□□ -0.21
TFE3-201ENST00000315869 OR2W5A6NFC9 320 aa13.71□□□□□ -0.22
TFE3-201ENST00000315869 CFDP00746 253 aaPredicted RBP13.71□□□□□ -0.22
TFE3-201ENST00000315869 PROS1P07225 676 aa13.71□□□□□ -0.22
TFE3-201ENST00000315869 PGDP52209 483 aa13.71□□□□□ -0.22
TFE3-201ENST00000315869 ERVK-25P63136 954 aa13.71□□□□□ -0.22
TFE3-201ENST00000315869 SFTPA2Q8IWL1 248 aa13.71□□□□□ -0.22
TFE3-201ENST00000315869 OR4N2Q8NGD1 307 aa13.71□□□□□ -0.22
TFE3-201ENST00000315869 OR56B4Q8NH76 319 aa13.71□□□□□ -0.22
TFE3-201ENST00000315869 ANGPTL6Q8NI99 470 aa13.71□□□□□ -0.22
TFE3-201ENST00000315869 PATE1Q8WXA2 126 aa13.71□□□□□ -0.22
TFE3-201ENST00000315869 AHCYL2Q96HN2 611 aaKnown RBP13.71□□□□□ -0.22
TFE3-201ENST00000315869 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.71□□□□□ -0.22
TFE3-201ENST00000315869 TMEM168Q9H0V1 697 aa13.71□□□□□ -0.22
TFE3-201ENST00000315869 SLCO1C1Q9NYB5 712 aa13.71□□□□□ -0.22
TFE3-201ENST00000315869 TAS2R10Q9NYW0 307 aa13.71□□□□□ -0.22
TFE3-201ENST00000315869 CDV3Q9UKY7 258 aaKnown RBP13.71□□□□□ -0.22
TFE3-201ENST00000315869 TDRD6O60522 2096 aaKnown RBP13.7□□□□□ -0.22
TFE3-201ENST00000315869 CNOT1A5YKK6 2376 aaKnown RBP13.7□□□□□ -0.22
TFE3-201ENST00000315869 A0A0G2JK05 382 aa13.7□□□□□ -0.22
TFE3-201ENST00000315869 IGFALSP35858 605 aa13.7□□□□□ -0.22
TFE3-201ENST00000315869 RPS21P63220 83 aaKnown RBP13.7□□□□□ -0.22
TFE3-201ENST00000315869 ACTC1P68032 377 aa13.7□□□□□ -0.22
TFE3-201ENST00000315869 ACTA1P68133 377 aa13.7□□□□□ -0.22
TFE3-201ENST00000315869 LGALS3BPQ08380 585 aa13.7□□□□□ -0.22
TFE3-201ENST00000315869 GRK1Q15835 563 aa13.7□□□□□ -0.22
TFE3-201ENST00000315869 GARNL3Q5VVW2 1013 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms