RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 SLC25A18Q9H1K4 315 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 CXorf36Q9H7Y0 433 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 ELOVL3Q9HB03 270 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 MTCH2Q9Y6C9 303 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 ATP23Q9Y6H3 246 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 PRKNO60260 465 aaPredicted RBP12.51□□□□□ -0.41
RFFL-201ENST00000315249 EIF1BO60739 113 aaKnown RBP12.51□□□□□ -0.41
RFFL-201ENST00000315249 ALDOCP09972 364 aaKnown RBP12.51□□□□□ -0.41
RFFL-201ENST00000315249 GPR3P46089 330 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 SEC61A1P61619 476 aaKnown RBP12.51□□□□□ -0.41
RFFL-201ENST00000315249 OR2T11Q8NH01 316 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 BAHD1Q8TBE0 780 aaPredicted RBP12.51□□□□□ -0.41
RFFL-201ENST00000315249 EGLN3Q9H6Z9 239 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 PDFQ9HBH1 243 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 DUSP2Q05923 314 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 GPR50Q13585 617 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 GLYR1Q49A26 553 aaPredicted RBP12.51□□□□□ -0.41
RFFL-201ENST00000315249 KDM8Q8N371 416 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 EXD3Q8N9H8 876 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 CADM4Q8NFZ8 388 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 GAB3Q8WWW8 586 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 TSLPQ969D9 159 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 UBXN10Q96LJ8 280 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 MED20Q9H944 212 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 LYRM4Q9HD34 91 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 ALG5Q9Y673 324 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 MYOFQ9NZM1 2061 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 MS4A15Q8N5U1 240 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 ZPBPQ9BS86 351 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 CCDC59Q9P031 241 aaKnown RBP12.51□□□□□ -0.41
RFFL-201ENST00000315249 NDRG3Q9UGV2 375 aa12.51□□□□□ -0.41
RFFL-201ENST00000315249 XIRP1Q702N8 1843 aaKnown RBP12.5□□□□□ -0.41
RFFL-201ENST00000315249 OR6C70A6NIJ9 312 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 PIAS2O75928 621 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 SLITRK5O94991 958 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 CEACAM5P06731 702 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 STOMP27105 288 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 OGFRL1Q5TC84 451 aaPredicted RBP12.5□□□□□ -0.41
RFFL-201ENST00000315249 GTF2H4Q92759 462 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 APH1AQ96BI3 265 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 TAMM41Q96BW9 452 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 ZNF71Q9NQZ8 489 aaPredicted RBP12.5□□□□□ -0.41
RFFL-201ENST00000315249 MEN1O00255 615 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 ZNF813Q6ZN06 617 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 OLIG3Q7RTU3 272 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 WFDC8Q8IUA0 241 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 LANCL2Q9NS86 450 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 TRAV18A0A075B6X5 111 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 A0A087WUU8 490 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 SPTY2D1-AS1A0A0U1RR47 76 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 ZNF593O00488 134 aaPredicted RBP12.5□□□□□ -0.41
RFFL-201ENST00000315249 OR2J2O76002 312 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 MT-CO3P00414 261 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 KNG1P01042 644 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 CD40LGP29965 261 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 C1orf53Q5VUE5 145 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 SLC22A25Q6T423 547 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 OR8J2Q8NGG1 315 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 ERVK13-1Q9NX77 482 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 SERGEFQ9UGK8 458 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 ITGB2P05107 769 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 COX20Q5RI15 118 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 TMEM207Q6UWW9 146 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 CFAP77Q6ZQR2 320 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 LILRA2Q8N149 483 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 ITFG2Q969R8 447 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 ELP4Q96EB1 424 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 PCDH17O14917 1159 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 EFNA3P52797 238 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 FBXL6Q8N531 539 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 PSMF1Q92530 271 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 PTTG2Q9NZH5 202 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 TMEM181Q9P2C4 612 aa12.5□□□□□ -0.41
RFFL-201ENST00000315249 AKR7A3O95154 331 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 EPHA5P54756 1037 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 TRMT12Q53H54 448 aaKnown RBP12.49□□□□□ -0.41
RFFL-201ENST00000315249 ZNF517Q6ZMY9 492 aaPredicted RBP12.49□□□□□ -0.41
RFFL-201ENST00000315249 SLC16A11Q8NCK7 471 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 OR5M9Q8NGP3 310 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 SMOXQ9NWM0 555 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 LHX6Q9UPM6 363 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 LRP5O75197 1615 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 MEGF11A6BM72 1044 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 GABBR2O75899 941 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 RAD52P43351 418 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 SPOCK1Q08629 439 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 SIGLEC14Q08ET2 396 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 PPA1Q15181 289 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 TBC1D28Q2M2D7 210 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 OR4K15Q8NH41 348 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 C12orf43Q96C57 262 aaKnown RBP12.49□□□□□ -0.41
RFFL-201ENST00000315249 FIGNL2A6NMB9 653 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 GRPP07492 148 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 GSTT2P0CG29 244 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 SF3A2Q15428 464 aaKnown RBP12.49□□□□□ -0.41
RFFL-201ENST00000315249 ZNF684Q5T5D7 378 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 XKRXQ6PP77 449 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 BPHLQ86WA6 291 aaPredicted RBP12.49□□□□□ -0.41
RFFL-201ENST00000315249 RAB39BQ96DA2 213 aa12.49□□□□□ -0.41
RFFL-201ENST00000315249 MS4A6EQ96DS6 147 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms