RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 DNAJA3Q96EY1 480 aa17.69■□□□□ 0.42
VEGFB-201ENST00000309422 TPD52L3Q96J77 140 aa17.69■□□□□ 0.42
VEGFB-201ENST00000309422 OPN3Q9H1Y3 402 aaPredicted RBP17.69■□□□□ 0.42
VEGFB-201ENST00000309422 CMTM6Q9NX76 183 aa17.69■□□□□ 0.42
VEGFB-201ENST00000309422 SH3GLB1Q9Y371 365 aa17.69■□□□□ 0.42
VEGFB-201ENST00000309422 ICE1Q9Y2F5 2266 aa17.69■□□□□ 0.42
VEGFB-201ENST00000309422 FLNBO75369 2602 aaKnown RBP17.69■□□□□ 0.42
VEGFB-201ENST00000309422 ARHGAP21Q5T5U3 1957 aa17.68■□□□□ 0.42
VEGFB-201ENST00000309422 FPR1P21462 350 aa17.68■□□□□ 0.42
VEGFB-201ENST00000309422 KDELR2P33947 212 aa17.68■□□□□ 0.42
VEGFB-201ENST00000309422 TAS2R41P59536 307 aa17.68■□□□□ 0.42
VEGFB-201ENST00000309422 CEACAM7Q14002 265 aa17.68■□□□□ 0.42
VEGFB-201ENST00000309422 MFSD13AQ14CX5 517 aa17.68■□□□□ 0.42
VEGFB-201ENST00000309422 NRF1Q16656 503 aa17.68■□□□□ 0.42
VEGFB-201ENST00000309422 DUSP7Q16829 419 aa17.68■□□□□ 0.42
VEGFB-201ENST00000309422 PAQR6Q6TCH4 344 aa17.68■□□□□ 0.42
VEGFB-201ENST00000309422 TUSC5Q8IXB3 177 aa17.68■□□□□ 0.42
VEGFB-201ENST00000309422 BCO1Q9HAY6 547 aa17.68■□□□□ 0.42
VEGFB-201ENST00000309422 CPSF4LA6NMK7 179 aaKnown RBP17.67■□□□□ 0.42
VEGFB-201ENST00000309422 ZNF724A8MTY0 619 aa17.67■□□□□ 0.42
VEGFB-201ENST00000309422 CXCR6O00574 342 aa17.67■□□□□ 0.42
VEGFB-201ENST00000309422 NME4O00746 187 aa17.67■□□□□ 0.42
VEGFB-201ENST00000309422 CASKO14936 926 aa17.67■□□□□ 0.42
VEGFB-201ENST00000309422 IGFBP2P18065 325 aa17.67■□□□□ 0.42
VEGFB-201ENST00000309422 HTR2AP28223 471 aa17.67■□□□□ 0.42
VEGFB-201ENST00000309422 CD79BP40259 229 aa17.67■□□□□ 0.42
VEGFB-201ENST00000309422 GSK3BP49841 420 aa17.67■□□□□ 0.42
VEGFB-201ENST00000309422 BNIP2Q12982 314 aa17.67■□□□□ 0.42
VEGFB-201ENST00000309422 KRT72Q14CN4 511 aa17.67■□□□□ 0.42
VEGFB-201ENST00000309422 PDK3Q15120 406 aa17.67■□□□□ 0.42
VEGFB-201ENST00000309422 GUSBP1Q15486 140 aa17.67■□□□□ 0.42
VEGFB-201ENST00000309422 CYBRD1Q53TN4 286 aa17.67■□□□□ 0.42
VEGFB-201ENST00000309422 SAMD4BQ5PRF9 694 aaKnown RBP17.67■□□□□ 0.42
VEGFB-201ENST00000309422 OTUD3Q5T2D3 398 aaPredicted RBP17.67■□□□□ 0.42
VEGFB-201ENST00000309422 ABLIM2Q6H8Q1 611 aa17.67■□□□□ 0.42
VEGFB-201ENST00000309422 DEF8Q6ZN54 512 aa17.67■□□□□ 0.42
VEGFB-201ENST00000309422 CARM1Q86X55 608 aa17.67■□□□□ 0.42
VEGFB-201ENST00000309422 ZNF100Q8IYN0 542 aa17.67■□□□□ 0.42
VEGFB-201ENST00000309422 PGAM4Q8N0Y7 254 aa17.67■□□□□ 0.42
VEGFB-201ENST00000309422 C10orf53Q8N6V4 93 aa17.67■□□□□ 0.42
VEGFB-201ENST00000309422 BCAS4Q8TDM0 211 aa17.67■□□□□ 0.42
VEGFB-201ENST00000309422 FAM222BQ8WU58 562 aa17.67■□□□□ 0.42
VEGFB-201ENST00000309422 PSD2Q9BQI7 771 aa17.67■□□□□ 0.42
VEGFB-201ENST00000309422 POLR2J2Q9GZM3 115 aaKnown RBP17.67■□□□□ 0.42
VEGFB-201ENST00000309422 POLR2J3Q9H1A7 115 aaKnown RBP17.67■□□□□ 0.42
VEGFB-201ENST00000309422 NOSIPQ9Y314 301 aaKnown RBP17.67■□□□□ 0.42
VEGFB-201ENST00000309422 MED12Q93074 2177 aa17.67■□□□□ 0.42
VEGFB-201ENST00000309422 TRAV36DV7A0A075B6V5 113 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 A0A0B4J2E0 115 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 A0A1B0GX12 115 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 ZC3H12DA2A288 527 aaKnown RBP17.66■□□□□ 0.42
VEGFB-201ENST00000309422 TMEM229AB2RXF0 380 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 CHP2O43745 196 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 ZNF682O95780 498 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 IL1RL1Q01638 556 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 ENTPD8Q5MY95 495 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 TMEM225Q6GV28 225 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 GPAT4Q86UL3 456 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 GPR32P1Q8NGA4 272 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 OR6T1Q8NGN1 323 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 SLC25A36Q96CQ1 311 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 PLSCR4Q9NRQ2 329 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 FAM53CQ9NYF3 392 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 ABCD2Q9UBJ2 740 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 RPS6KA6Q9UK32 745 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 TRAPPC13A5PLN9 417 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 LIPT2A6NK58 231 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 C16orf97H3BN30 126 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 VAMP5O95183 116 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 RPS5P46782 204 aaKnown RBP17.66■□□□□ 0.42
VEGFB-201ENST00000309422 PCYT1AP49585 367 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 FAM69AQ5T7M9 428 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 FKBP9P1Q75LS8 142 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 ZNF610Q8N9Z0 462 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 MFSD8Q8NHS3 518 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 ADAMTS16Q8TE57 1224 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 C14orf79Q96F83 325 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 MPP4Q96JB8 637 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 MED18Q9BUE0 208 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 ASPNQ9BXN1 380 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 KLHL4Q9C0H6 718 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 PARPBPQ9NWS1 579 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 ZNF226Q9NYT6 803 aa17.66■□□□□ 0.42
VEGFB-201ENST00000309422 A0A087WUJ7 227 aa17.65■□□□□ 0.42
VEGFB-201ENST00000309422 MRPL33O75394 65 aaKnown RBP17.65■□□□□ 0.42
VEGFB-201ENST00000309422 IFNW1P05000 195 aa17.65■□□□□ 0.42
VEGFB-201ENST00000309422 IMPDH2P12268 514 aa17.65■□□□□ 0.42
VEGFB-201ENST00000309422 CALB2P22676 271 aa17.65■□□□□ 0.42
VEGFB-201ENST00000309422 TLE4Q04727 773 aa17.65■□□□□ 0.42
VEGFB-201ENST00000309422 C8orf82Q6P1X6 216 aaPredicted RBP17.65■□□□□ 0.42
VEGFB-201ENST00000309422 TTC33Q6PID6 262 aaPredicted RBP17.65■□□□□ 0.42
VEGFB-201ENST00000309422 CASP12Q6UXS9 341 aa17.65■□□□□ 0.42
VEGFB-201ENST00000309422 COMTD1Q86VU5 262 aa17.65■□□□□ 0.42
VEGFB-201ENST00000309422 TMEM200AQ86VY9 491 aa17.65■□□□□ 0.42
VEGFB-201ENST00000309422 UBE2J2Q8N2K1 259 aa17.65■□□□□ 0.42
VEGFB-201ENST00000309422 GEMIN6Q8WXD5 167 aaKnown RBP17.65■□□□□ 0.42
VEGFB-201ENST00000309422 APH1AQ96BI3 265 aa17.65■□□□□ 0.42
VEGFB-201ENST00000309422 SF3B5Q9BWJ5 86 aaKnown RBP17.65■□□□□ 0.42
VEGFB-201ENST00000309422 ARL8BQ9NVJ2 186 aa17.65■□□□□ 0.42
VEGFB-201ENST00000309422 MAGEL2Q9UJ55 1249 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms