RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 SLC17A1Q14916 467 aa17.49■□□□□ 0.39
PDZRN3-202ENST00000308537 LARS2Q15031 903 aaKnown RBP17.49■□□□□ 0.39
PDZRN3-202ENST00000308537 ZSWIM7Q19AV6 140 aa17.49■□□□□ 0.39
PDZRN3-202ENST00000308537 FBXW9Q5XUX1 488 aa17.49■□□□□ 0.39
PDZRN3-202ENST00000308537 WBP2NLQ6ICG8 309 aa17.49■□□□□ 0.39
PDZRN3-202ENST00000308537 ADAM5Q6NVV9 412 aa17.49■□□□□ 0.39
PDZRN3-202ENST00000308537 PAQR6Q6TCH4 344 aa17.49■□□□□ 0.39
PDZRN3-202ENST00000308537 RETREG3Q86VR2 466 aa17.49■□□□□ 0.39
PDZRN3-202ENST00000308537 ZIC4Q8N9L1 334 aa17.49■□□□□ 0.39
PDZRN3-202ENST00000308537 BBS10Q8TAM1 723 aa17.49■□□□□ 0.39
PDZRN3-202ENST00000308537 HSD17B8Q92506 261 aa17.49■□□□□ 0.39
PDZRN3-202ENST00000308537 PIGTQ969N2 578 aa17.49■□□□□ 0.39
PDZRN3-202ENST00000308537 SLC35B4Q969S0 331 aa17.49■□□□□ 0.39
PDZRN3-202ENST00000308537 DDIT4LQ96D03 193 aa17.49■□□□□ 0.39
PDZRN3-202ENST00000308537 CPPED1Q9BRF8 314 aaPredicted RBP17.49■□□□□ 0.39
PDZRN3-202ENST00000308537 RAD21L1Q9H4I0 556 aa17.49■□□□□ 0.39
PDZRN3-202ENST00000308537 NPAP1Q9NZP6 1156 aa17.49■□□□□ 0.39
PDZRN3-202ENST00000308537 EMC3Q9P0I2 261 aa17.49■□□□□ 0.39
PDZRN3-202ENST00000308537 IGHV3-9P01782 118 aa17.48■□□□□ 0.39
PDZRN3-202ENST00000308537 ADSLP30566 484 aaPredicted RBP17.48■□□□□ 0.39
PDZRN3-202ENST00000308537 NKX6-1P78426 367 aaPredicted RBP17.48■□□□□ 0.39
PDZRN3-202ENST00000308537 HOXC5Q00444 222 aa17.48■□□□□ 0.39
PDZRN3-202ENST00000308537 GLIPR1L2Q4G1C9 344 aa17.48■□□□□ 0.39
PDZRN3-202ENST00000308537 ZNF311Q5JNZ3 666 aa17.48■□□□□ 0.39
PDZRN3-202ENST00000308537 TMEM99Q8N816 258 aa17.48■□□□□ 0.39
PDZRN3-202ENST00000308537 NFKBIDQ8NI38 313 aa17.48■□□□□ 0.39
PDZRN3-202ENST00000308537 ZHX1-C8orf76Q96EF9 292 aa17.48■□□□□ 0.39
PDZRN3-202ENST00000308537 WFDC6Q9BQY6 131 aa17.48■□□□□ 0.39
PDZRN3-202ENST00000308537 TMEM38AQ9H6F2 299 aa17.48■□□□□ 0.39
PDZRN3-202ENST00000308537 ZNF446Q9NWS9 450 aa17.48■□□□□ 0.39
PDZRN3-202ENST00000308537 NOSIPQ9Y314 301 aaKnown RBP17.48■□□□□ 0.39
PDZRN3-202ENST00000308537 IFT52Q9Y366 437 aa17.48■□□□□ 0.39
PDZRN3-202ENST00000308537 DPRXA6NFQ7 191 aa17.47■□□□□ 0.39
PDZRN3-202ENST00000308537 FTCDNL1E5RQL4 147 aa17.47■□□□□ 0.39
PDZRN3-202ENST00000308537 GPR171O14626 319 aa17.47■□□□□ 0.39
PDZRN3-202ENST00000308537 HS3ST1O14792 307 aa17.47■□□□□ 0.39
PDZRN3-202ENST00000308537 TPST1O60507 370 aa17.47■□□□□ 0.39
PDZRN3-202ENST00000308537 EIF1BO60739 113 aaKnown RBP17.47■□□□□ 0.39
PDZRN3-202ENST00000308537 ITGA5P08648 1049 aa17.47■□□□□ 0.39
PDZRN3-202ENST00000308537 UQCRBP14927 111 aa17.47■□□□□ 0.39
PDZRN3-202ENST00000308537 PAX1P15863 534 aa17.47■□□□□ 0.39
PDZRN3-202ENST00000308537 HTR2AP28223 471 aa17.47■□□□□ 0.39
PDZRN3-202ENST00000308537 RIPPLY3P57055 190 aa17.47■□□□□ 0.39
PDZRN3-202ENST00000308537 CEACAM7Q14002 265 aa17.47■□□□□ 0.39
PDZRN3-202ENST00000308537 RUNDC3AQ59EK9 446 aa17.47■□□□□ 0.39
PDZRN3-202ENST00000308537 GCNT6Q5T4J0 391 aa17.47■□□□□ 0.39
PDZRN3-202ENST00000308537 ZNF100Q8IYN0 542 aa17.47■□□□□ 0.39
PDZRN3-202ENST00000308537 CADM2Q8N3J6 435 aa17.47■□□□□ 0.39
PDZRN3-202ENST00000308537 DPP10Q8N608 796 aa17.47■□□□□ 0.39
PDZRN3-202ENST00000308537 ZNF611Q8N823 705 aa17.47■□□□□ 0.39
PDZRN3-202ENST00000308537 NEUROG1Q92886 237 aa17.47■□□□□ 0.39
PDZRN3-202ENST00000308537 APH1AQ96BI3 265 aa17.47■□□□□ 0.39
PDZRN3-202ENST00000308537 CCL19Q99731 98 aa17.47■□□□□ 0.39
PDZRN3-202ENST00000308537 USB1Q9BQ65 265 aaKnown RBP17.47■□□□□ 0.39
PDZRN3-202ENST00000308537 PTDSS2Q9BVG9 487 aa17.47■□□□□ 0.39
PDZRN3-202ENST00000308537 AMBRA1Q9C0C7 1298 aa17.47■□□□□ 0.39
PDZRN3-202ENST00000308537 DCTN4Q9UJW0 460 aa17.47■□□□□ 0.39
PDZRN3-202ENST00000308537 FN1P02751 2386 aaKnown RBP17.47■□□□□ 0.39
PDZRN3-202ENST00000308537 AQP7P3A6NL99 342 aa17.46■□□□□ 0.39
PDZRN3-202ENST00000308537 PRKAR1BP31321 381 aa17.46■□□□□ 0.39
PDZRN3-202ENST00000308537 IDUAP35475 653 aa17.46■□□□□ 0.39
PDZRN3-202ENST00000308537 CDK6Q00534 326 aa17.46■□□□□ 0.39
PDZRN3-202ENST00000308537 SELPLGQ14242 412 aa17.46■□□□□ 0.39
PDZRN3-202ENST00000308537 TIMM23BQ5SRD1 257 aa17.46■□□□□ 0.39
PDZRN3-202ENST00000308537 SHEQ5VZ18 495 aa17.46■□□□□ 0.39
PDZRN3-202ENST00000308537 DHRS4L2Q6PKH6 230 aa17.46■□□□□ 0.39
PDZRN3-202ENST00000308537 C6orf89Q6UWU4 347 aa17.46■□□□□ 0.39
PDZRN3-202ENST00000308537 PTOV1Q86YD1 416 aa17.46■□□□□ 0.39
PDZRN3-202ENST00000308537 TMEM45BQ96B21 275 aa17.46■□□□□ 0.39
PDZRN3-202ENST00000308537 ZNF385AQ96PM9 386 aaKnown RBP17.46■□□□□ 0.39
PDZRN3-202ENST00000308537 GSX2Q9BZM3 304 aa17.46■□□□□ 0.39
PDZRN3-202ENST00000308537 GSX1Q9H4S2 264 aaPredicted RBP17.46■□□□□ 0.39
PDZRN3-202ENST00000308537 NPHS2Q9NP85 383 aa17.46■□□□□ 0.39
PDZRN3-202ENST00000308537 ZNF232Q9UNY5 417 aa17.46■□□□□ 0.39
PDZRN3-202ENST00000308537 OR5H1A6NKK0 313 aa17.45■□□□□ 0.38
PDZRN3-202ENST00000308537 A8MVM7 634 aa17.45■□□□□ 0.38
PDZRN3-202ENST00000308537 TPST2O60704 377 aa17.45■□□□□ 0.38
PDZRN3-202ENST00000308537 AKR7A3O95154 331 aa17.45■□□□□ 0.38
PDZRN3-202ENST00000308537 DANCRP0C864 163 aa17.45■□□□□ 0.38
PDZRN3-202ENST00000308537 FOSL1P15407 271 aa17.45■□□□□ 0.38
PDZRN3-202ENST00000308537 PPIBP23284 216 aaKnown RBP17.45■□□□□ 0.38
PDZRN3-202ENST00000308537 CXCR1P25024 350 aa17.45■□□□□ 0.38
PDZRN3-202ENST00000308537 PCBP3P57721 371 aaKnown RBP17.45■□□□□ 0.38
PDZRN3-202ENST00000308537 BSPH1Q075Z2 132 aa17.45■□□□□ 0.38
PDZRN3-202ENST00000308537 OR7A5Q15622 319 aa17.45■□□□□ 0.38
PDZRN3-202ENST00000308537 HSP90B2PQ58FF3 399 aa17.45■□□□□ 0.38
PDZRN3-202ENST00000308537 Q5PR19 223 aa17.45■□□□□ 0.38
PDZRN3-202ENST00000308537 OTUD3Q5T2D3 398 aaPredicted RBP17.45■□□□□ 0.38
PDZRN3-202ENST00000308537 TSPO2Q5TGU0 170 aa17.45■□□□□ 0.38
PDZRN3-202ENST00000308537 CGB2Q6NT52 195 aa17.45■□□□□ 0.38
PDZRN3-202ENST00000308537 REEP3Q6NUK4 255 aa17.45■□□□□ 0.38
PDZRN3-202ENST00000308537 LSMEM1Q8N8F7 131 aa17.45■□□□□ 0.38
PDZRN3-202ENST00000308537 OR52E4Q8NGH9 312 aa17.45■□□□□ 0.38
PDZRN3-202ENST00000308537 AKAP1Q92667 903 aaKnown RBP eCLIP17.45■□□□□ 0.38
PDZRN3-202ENST00000308537 PRR14Q9BWN1 585 aa17.45■□□□□ 0.38
PDZRN3-202ENST00000308537 SLC7A10Q9NS82 523 aa17.45■□□□□ 0.38
PDZRN3-202ENST00000308537 ZNF701Q9NV72 531 aaPredicted RBP17.45■□□□□ 0.38
PDZRN3-202ENST00000308537 RNF115Q9Y4L5 304 aa17.45■□□□□ 0.38
PDZRN3-202ENST00000308537 HEATR1Q9H583 2144 aaKnown RBP17.45■□□□□ 0.38
PDZRN3-202ENST00000308537 IGKV1D-42A0A075B6H8 117 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms