RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 PAPLNO95428 1278 aa17.94■□□□□ 0.46
USP48-201ENST00000308271 SOD1P00441 154 aa17.94■□□□□ 0.46
USP48-201ENST00000308271 GAAP10253 952 aa17.94■□□□□ 0.46
USP48-201ENST00000308271 LIPCP11150 499 aa17.94■□□□□ 0.46
USP48-201ENST00000308271 C5AR1P21730 350 aa17.94■□□□□ 0.46
USP48-201ENST00000308271 GBX1Q14549 363 aa17.94■□□□□ 0.46
USP48-201ENST00000308271 NKAIN4Q8IVV8 208 aa17.94■□□□□ 0.46
USP48-201ENST00000308271 KCNJ16Q9NPI9 418 aa17.94■□□□□ 0.46
USP48-201ENST00000308271 HIF3AQ9Y2N7 669 aa17.94■□□□□ 0.46
USP48-201ENST00000308271 CHST2Q9Y4C5 530 aa17.94■□□□□ 0.46
USP48-201ENST00000308271 PIP5K1CO60331 668 aa17.94■□□□□ 0.46
USP48-201ENST00000308271 OR8U9P0C7N5 309 aa17.94■□□□□ 0.46
USP48-201ENST00000308271 CRABP1P29762 137 aa17.94■□□□□ 0.46
USP48-201ENST00000308271 GPR139Q6DWJ6 353 aa17.94■□□□□ 0.46
USP48-201ENST00000308271 DNAJA3Q96EY1 480 aa17.94■□□□□ 0.46
USP48-201ENST00000308271 MYEOVQ96EZ4 313 aa17.94■□□□□ 0.46
USP48-201ENST00000308271 KLRF1Q9NZS2 232 aa17.94■□□□□ 0.46
USP48-201ENST00000308271 MYEF2Q9P2K5 600 aaKnown RBP17.94■□□□□ 0.46
USP48-201ENST00000308271 HRH3Q9Y5N1 445 aa17.94■□□□□ 0.46
USP48-201ENST00000308271 ETHE1O95571 254 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 FLI1Q01543 452 aaPredicted RBP17.93■□□□□ 0.46
USP48-201ENST00000308271 HEPHL1Q6MZM0 1159 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 SLC17A9Q9BYT1 436 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 SLC23A1Q9UHI7 598 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 KIF25Q9UIL4 384 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 NUP214P35658 2090 aaPredicted RBP17.93■□□□□ 0.46
USP48-201ENST00000308271 TMEM202A6NGA9 273 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 TMEM212A6NML5 194 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 PMS2P2O95744 297 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 CTSAP10619 480 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 CLRN1P58418 232 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 HSD11B2P80365 405 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 PLCXD2Q0VAA5 305 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 FAM122BQ7Z309 247 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 CD163Q86VB7 1156 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 KLHDC8BQ8IXV7 354 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 SLC39A11Q8N1S5 342 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 SLC25A21Q9BQT8 299 aaPredicted RBP17.93■□□□□ 0.46
USP48-201ENST00000308271 MAN2C1Q9NTJ4 1040 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 SYT7O43581 403 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 KIR2DS3Q14952 304 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 TMEM244Q5VVB8 128 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 STEAP1BQ6NZ63 245 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 TMEM106AQ96A25 262 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 LRRC46Q96FV0 321 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 MICU1Q9BPX6 476 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 ALG12Q9BV10 488 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 BCL2L10Q9HD36 194 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 C2orf42Q9NWW7 574 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 MARCH5Q9NX47 278 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 MOKQ9UQ07 419 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 SIX6O95475 246 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 EIF4EP06730 217 aaKnown RBP17.93■□□□□ 0.46
USP48-201ENST00000308271 FAM26DQ5JW98 314 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 HRH4Q9H3N8 390 aa17.93■□□□□ 0.46
USP48-201ENST00000308271 STRCQ7RTU9 1775 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 ABCA3Q99758 1704 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 SCO2O43819 266 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 GPR75O95800 540 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 WNT3P56703 355 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 EIF2B1Q14232 305 aaKnown RBP17.92■□□□□ 0.46
USP48-201ENST00000308271 ZC3H14Q6PJT7 736 aaKnown RBP17.92■□□□□ 0.46
USP48-201ENST00000308271 TMEM99Q8N816 258 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 GOT1L1Q8NHS2 421 aaPredicted RBP17.92■□□□□ 0.46
USP48-201ENST00000308271 LINC01599Q8WXQ3 324 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 PMM1Q92871 262 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 MARC2Q969Z3 335 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.92■□□□□ 0.46
USP48-201ENST00000308271 SLC5A7Q9GZV3 580 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 PIGMQ9H3S5 423 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 ERVMER34-1Q9H9K5 563 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 POLMQ9NP87 494 aaPredicted RBP17.92■□□□□ 0.46
USP48-201ENST00000308271 PRSS16Q9NQE7 514 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 ATAD5Q96QE3 1844 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 D6RAR5 112 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 H3BQ06 376 aaPredicted RBP17.92■□□□□ 0.46
USP48-201ENST00000308271 GPR171O14626 319 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 LDB3O75112 727 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 ZNF41P51814 821 aaPredicted RBP17.92■□□□□ 0.46
USP48-201ENST00000308271 CSNK2A1P68400 391 aaPredicted RBP17.92■□□□□ 0.46
USP48-201ENST00000308271 PEA15Q15121 130 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 SLC48A1Q6P1K1 146 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 CSNK2A3Q8NEV1 391 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 OR52I2Q8NH67 350 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 BMFQ96LC9 184 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 HCSTQ9UBK5 93 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 NHSL1Q5SYE7 1610 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 SCN1AP35498 2009 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 TMEM72A0PK05 275 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 F11P03951 625 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 HMGA2P52926 109 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 PDX1P52945 283 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 GLO1Q04760 184 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 GPR18Q14330 331 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 ZBTB44Q8NCP5 570 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 ZNF649Q9BS31 505 aa17.92■□□□□ 0.46
USP48-201ENST00000308271 KIAA0100Q14667 2235 aaKnown RBP17.91■□□□□ 0.46
USP48-201ENST00000308271 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.91■□□□□ 0.46
USP48-201ENST00000308271 UBL4AP11441 157 aa17.91■□□□□ 0.46
USP48-201ENST00000308271 SOX18P35713 384 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms